RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 PFASO15067 1338 aa18.07■□□□□ 0.48
TRIM3-213ENST00000533309 MRPS9P82933 396 aaKnown RBP18.06■□□□□ 0.48
TRIM3-213ENST00000533309 PGM5Q15124 567 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 CEP55Q53EZ4 464 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 CCDC183Q5T5S1 534 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 ANKRD13CQ8N6S4 541 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 SHCBP1Q8NEM2 672 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 GJA10Q969M2 543 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 ZIC5Q96T25 663 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
TRIM3-213ENST00000533309 PLXNA1Q9UIW2 1896 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 ASTN1O14525 1302 aa18.06■□□□□ 0.48
TRIM3-213ENST00000533309 TXKP42681 527 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 FXR2P51116 673 aaKnown RBP eCLIP18.05■□□□□ 0.48
TRIM3-213ENST00000533309 ZSCAN23Q3MJ62 389 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 IFNL1Q8IU54 200 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 ANKRD35Q8N283 1001 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 IGSF22Q8N9C0 903 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 GPRC5AQ8NFJ5 357 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 SYAP1Q96A49 352 aaPredicted RBP18.05■□□□□ 0.48
TRIM3-213ENST00000533309 ZFP91Q96JP5 570 aaPredicted RBP18.05■□□□□ 0.48
TRIM3-213ENST00000533309 MROH8Q9H579 483 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 KCNH3Q9ULD8 1083 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 MCM3APO60318 1980 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 A0A087X0B3 334 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 MEIS1O00470 390 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 TBX3O15119 743 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 MSH4O15457 936 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 ITGB5P18084 799 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 ZNF76P36508 570 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 INHBEP58166 350 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 CNTN2Q02246 1040 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 CYP4F22Q6NT55 531 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 ANP32EQ9BTT0 268 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 CLSTN2Q9H4D0 955 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 EFCC1Q9HA90 598 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 FAM13BQ9NYF5 915 aa18.05■□□□□ 0.48
TRIM3-213ENST00000533309 DOCK3Q8IZD9 2030 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 PP2D1A8MPX8 630 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 ZNF202O95125 648 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 CDC25AP30304 524 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 TECP42680 631 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 SYKP43405 635 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 FAM110CQ1W6H9 321 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 ARHGEF16Q5VV41 709 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 FAM133AQ8N9E0 248 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 NSUN6Q8TEA1 469 aaKnown RBP18.04■□□□□ 0.48
TRIM3-213ENST00000533309 UIMC1Q96RL1 719 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 MXRA8Q9BRK3 442 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 NUP62CLQ9H1M0 184 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 TTC12Q9H892 705 aaPredicted RBP18.04■□□□□ 0.48
TRIM3-213ENST00000533309 UBIAD1Q9Y5Z9 338 aa18.04■□□□□ 0.48
TRIM3-213ENST00000533309 RASSF10A6NK89 507 aa18.03■□□□□ 0.48
TRIM3-213ENST00000533309 KINO60870 393 aaKnown RBP18.03■□□□□ 0.48
TRIM3-213ENST00000533309 SREBF2Q12772 1141 aa18.03■□□□□ 0.48
TRIM3-213ENST00000533309 PLA2G4DQ86XP0 818 aa18.03■□□□□ 0.48
TRIM3-213ENST00000533309 AK8Q96MA6 479 aa18.03■□□□□ 0.48
TRIM3-213ENST00000533309 CREBZFQ9NS37 354 aa18.03■□□□□ 0.48
TRIM3-213ENST00000533309 DNAJC25-GNG10A0A024R161 153 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 POTEMA6NI47 508 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 NR3C2P08235 984 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 BCRP11274 1271 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 APLP1P51693 650 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 CCNA1P78396 465 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 SETQ01105 290 aaPredicted RBP18.02■□□□□ 0.48
TRIM3-213ENST00000533309 SPIRE1Q08AE8 756 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 TAF1CQ15572 869 aaPredicted RBP18.02■□□□□ 0.48
TRIM3-213ENST00000533309 NIPA1Q7RTP0 329 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 VSIG10LQ86VR7 867 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 SLFN12Q8IYM2 578 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 DNERQ8NFT8 737 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 FGD4Q96M96 766 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 FAM20AQ96MK3 541 aa18.02■□□□□ 0.48
TRIM3-213ENST00000533309 ZNF236Q9UL36 1845 aa18.02■□□□□ 0.47
TRIM3-213ENST00000533309 DOCK5Q9H7D0 1870 aa18.02■□□□□ 0.47
TRIM3-213ENST00000533309 SOWAHBA6NEL2 793 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 POTEB2H3BUK9 544 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 POLR2DO15514 142 aaKnown RBP18.01■□□□□ 0.47
TRIM3-213ENST00000533309 ARP10275 920 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 MYCLP12524 364 aaPredicted RBP18.01■□□□□ 0.47
TRIM3-213ENST00000533309 TM4SF4P48230 202 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 PDIA5Q14554 519 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 CAMK4Q16566 473 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 TMEM266Q2M3C6 531 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 XRRA1Q6P2D8 792 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 PAXIP1Q6ZW49 1069 aaPredicted RBP18.01■□□□□ 0.47
TRIM3-213ENST00000533309 PDILTQ8N807 584 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 SLC5A5Q92911 643 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 MMP19Q99542 508 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 MMTAG2Q9BU76 263 aaKnown RBP18.01■□□□□ 0.47
TRIM3-213ENST00000533309 WDR11Q9BZH6 1224 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 CCSER1Q9C0I3 900 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 PCDHA12Q9UN75 941 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 PGK2P07205 417 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 FCER1AP12319 257 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 CCND2P30279 289 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 ALDH5A1P51649 535 aaPredicted RBP18.01■□□□□ 0.47
TRIM3-213ENST00000533309 GRM1Q13255 1194 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 LONRF3Q496Y0 759 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 WDR78Q5VTH9 848 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms