RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 PXMP2Q9NR77 195 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 NOD1Q9Y239 953 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 MUC3AQ02505 3323 aa19.91■□□□□ 0.78
RPUSD4-207ENST00000532800 MYH7BA7E2Y1 1941 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 PTPRSQ13332 1948 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 KLRF2D3W0D1 207 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 RBAK-RBAKDNI3L0D1 243 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 RFC2P35250 354 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 SLC35G1Q2M3R5 365 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 TTC22Q5TAA0 569 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 GDF6Q6KF10 455 aaPredicted RBP19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 RETREG2Q8NC44 543 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 MAD2L2Q9UI95 211 aa19.9■□□□□ 0.78
RPUSD4-207ENST00000532800 TRANK1O15050 2925 aa19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 NR3C2P08235 984 aa19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 HSD17B4P51659 736 aa19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 BFSP2Q13515 415 aa19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 PTGISQ16647 500 aa19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 SYMPKQ92797 1274 aaKnown RBP19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 MTMR8Q96EF0 704 aa19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 AMNQ9BXJ7 453 aa19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 DDX41Q9UJV9 622 aaKnown RBP19.89■□□□□ 0.77
RPUSD4-207ENST00000532800 BAZ2BQ9UIF8 2168 aaKnown RBP19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 CA3P07451 260 aa19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 ACTN1P12814 892 aa19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 PTH1RQ03431 593 aa19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 DHX38Q92620 1227 aaKnown RBP19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 FTOQ9C0B1 505 aaKnown RBP eCLIP19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 SENP2Q9HC62 589 aa19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 THEGQ9P2T0 379 aa19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 MRVI1Q9Y6F6 885 aa19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 TAF6LQ9Y6J9 622 aa19.88■□□□□ 0.77
RPUSD4-207ENST00000532800 PALM3A6NDB9 673 aaPredicted RBP19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 ZBTB5O15062 677 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 EIF3JO75822 258 aaKnown RBP19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 ARHGEF15O94989 841 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 CYP21A2P08686 494 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 ZNF286BP0CG31 522 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 CASTP20810 708 aaKnown RBP19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 HOXA13P31271 388 aaPredicted RBP19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 GHRHRQ02643 423 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 TMEM67Q5HYA8 995 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 SESTD1Q86VW0 696 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 HOMER1Q86YM7 354 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 IL31RAQ8NI17 732 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 SLC9A7Q96T83 725 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 PDCD2LQ9BRP1 358 aa19.87■□□□□ 0.77
RPUSD4-207ENST00000532800 RFXAPO00287 272 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 SORBS3O60504 671 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 RGS20O76081 388 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 MYCLP12524 364 aaPredicted RBP19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 GPNMBQ14956 572 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 DGKDQ16760 1214 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 MICALL1Q8N3F8 863 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 EMID1Q96A84 441 aaPredicted RBP19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 ALG1Q9BT22 464 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 CERS4Q9HA82 394 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 HDAC6Q9UBN7 1215 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 GTF2IRD1Q9UHL9 959 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 PCDHA1Q9Y5I3 950 aa19.86■□□□□ 0.77
RPUSD4-207ENST00000532800 EPOPA6NHQ4 379 aa19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 PSEN2P49810 448 aa19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 GRM4Q14833 912 aa19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 CAGE1Q8TC20 777 aa19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 AFAP1L1Q8TED9 768 aa19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 ATXN2LQ8WWM7 1075 aaKnown RBP19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 ZFP91Q96JP5 570 aaPredicted RBP19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 PIGSQ96S52 555 aa19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 SUPT16HQ9Y5B9 1047 aaKnown RBP19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 XIRP2A4UGR9 3374 aa19.85■□□□□ 0.77
RPUSD4-207ENST00000532800 IFIT3O14879 490 aaKnown RBP19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 CYTH3O43739 400 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 F2P00734 622 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 CHMLP26374 656 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 TRDNQ13061 729 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 LAMC2Q13753 1193 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 MFSD10Q14728 455 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 PGM5Q15124 567 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 STOX1Q6ZVD7 989 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 LRRC8DQ7L1W4 858 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 HERC6Q8IVU3 1022 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 DHX37Q8IY37 1157 aaKnown RBP19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 CCDC155Q8N6L0 562 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 PPTC7Q8NI37 304 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 PHOSPHO2Q8TCD6 241 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 ASB2Q96Q27 587 aa19.84■□□□□ 0.77
RPUSD4-207ENST00000532800 PRRC2BQ5JSZ5 2229 aaKnown RBP19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 HAS3O00219 553 aa19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 SELPP16109 830 aa19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 KIAA0753Q2KHM9 967 aa19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 TCTN1Q2MV58 587 aa19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 SPRED2Q7Z698 418 aa19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 TMCO2Q7Z6W1 182 aaPredicted RBP19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 C7orf31Q8N865 590 aa19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 GPKOWQ92917 476 aaPredicted RBP eCLIP19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 WNT8BQ93098 351 aa19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 RIOX1Q9H6W3 641 aa19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 U3KPZ7 1027 aaPredicted RBP19.83■□□□□ 0.77
RPUSD4-207ENST00000532800 COL4A4P53420 1690 aaPredicted RBP19.82■□□□□ 0.76
RPUSD4-207ENST00000532800 E7EWF7 191 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms