RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 ATP2A2P16615 1042 aaKnown RBP20.77■□□□□ 0.92
PTPN11-204ENST00000531326 IGFBP4P22692 258 aa20.77■□□□□ 0.92
PTPN11-204ENST00000531326 CCDC85BQ15834 202 aaPredicted RBP20.77■□□□□ 0.92
PTPN11-204ENST00000531326 ENAHQ8N8S7 591 aaPredicted RBP20.77■□□□□ 0.92
PTPN11-204ENST00000531326 SYTL5Q8TDW5 730 aaPredicted RBP20.77■□□□□ 0.92
PTPN11-204ENST00000531326 ZSCAN10Q96SZ4 725 aaPredicted RBP20.77■□□□□ 0.92
PTPN11-204ENST00000531326 KAT14Q9H8E8 782 aa20.77■□□□□ 0.92
PTPN11-204ENST00000531326 PCDHA11Q9Y5I1 949 aa20.77■□□□□ 0.92
PTPN11-204ENST00000531326 ABCB11O95342 1321 aa20.77■□□□□ 0.91
PTPN11-204ENST00000531326 B4DLN1 442 aa20.76■□□□□ 0.91
PTPN11-204ENST00000531326 MRPL12P52815 198 aaKnown RBP20.76■□□□□ 0.91
PTPN11-204ENST00000531326 KRT32Q14532 448 aa20.76■□□□□ 0.91
PTPN11-204ENST00000531326 CCDC178Q5BJE1 867 aa20.76■□□□□ 0.91
PTPN11-204ENST00000531326 PPP2R2DQ66LE6 453 aa20.76■□□□□ 0.91
PTPN11-204ENST00000531326 CHST3Q7LGC8 479 aa20.76■□□□□ 0.91
PTPN11-204ENST00000531326 TET1Q8NFU7 2136 aa20.76■□□□□ 0.91
PTPN11-204ENST00000531326 NEK1Q96PY6 1258 aa20.76■□□□□ 0.91
PTPN11-204ENST00000531326 TRANK1O15050 2925 aa20.76■□□□□ 0.91
PTPN11-204ENST00000531326 PITPNM1O00562 1244 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 IQCF3P0C7M6 154 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 PTPN11Q06124 597 aaPredicted RBP20.75■□□□□ 0.91
PTPN11-204ENST00000531326 SEC23AQ15436 765 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 LY6KQ17RY6 165 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 QRICH1Q2TAL8 776 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 ASPRV1Q53RT3 343 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 AFG1LQ8WV93 481 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 CTAGE1Q96RT6 745 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 UBAC1Q9BSL1 405 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 MAF1Q9H063 256 aa20.75■□□□□ 0.91
PTPN11-204ENST00000531326 TRIP12Q14669 1992 aaPredicted RBP20.75■□□□□ 0.91
PTPN11-204ENST00000531326 XIRP2A4UGR9 3374 aa20.74■□□□□ 0.91
PTPN11-204ENST00000531326 ARHGAP1Q07960 439 aa20.74■□□□□ 0.91
PTPN11-204ENST00000531326 SEPT14Q6ZU15 432 aa20.74■□□□□ 0.91
PTPN11-204ENST00000531326 NSUN6Q8TEA1 469 aaKnown RBP20.74■□□□□ 0.91
PTPN11-204ENST00000531326 ATXN2LQ8WWM7 1075 aaKnown RBP20.74■□□□□ 0.91
PTPN11-204ENST00000531326 JMJD4Q9H9V9 463 aa20.74■□□□□ 0.91
PTPN11-204ENST00000531326 THEGQ9P2T0 379 aa20.74■□□□□ 0.91
PTPN11-204ENST00000531326 PRC1O43663 620 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 MMP3P08254 477 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 MCM5P33992 734 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 RFC2P35250 354 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 CHMP4BP1P59074 171 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 IGDCC4Q8TDY8 1250 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 KAT2BQ92831 832 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 JAKMIP1Q96N16 626 aaKnown RBP20.73■□□□□ 0.91
PTPN11-204ENST00000531326 ASB2Q96Q27 587 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 RMDN3Q96TC7 470 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 VAT1LQ9HCJ6 419 aa20.73■□□□□ 0.91
PTPN11-204ENST00000531326 OPLAHO14841 1288 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 IFIT3O14879 490 aaKnown RBP20.72■□□□□ 0.91
PTPN11-204ENST00000531326 GH1P01241 217 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 CA3P07451 260 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 PARP1P09874 1014 aaKnown RBP20.72■□□□□ 0.91
PTPN11-204ENST00000531326 EXOSC10Q01780 885 aaKnown RBP20.72■□□□□ 0.91
PTPN11-204ENST00000531326 TMEM67Q5HYA8 995 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 FBXO11Q86XK2 927 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 MCF2L2Q86YR7 1114 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 STAG2Q8N3U4 1231 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 RETREG2Q8NC44 543 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 IWS1Q96ST2 819 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 SENP2Q9HC62 589 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 PTPRSQ13332 1948 aa20.72■□□□□ 0.91
PTPN11-204ENST00000531326 ACTN1P12814 892 aa20.71■□□□□ 0.91
PTPN11-204ENST00000531326 EIF2AK2P19525 551 aaKnown RBP20.71■□□□□ 0.91
PTPN11-204ENST00000531326 BFSP2Q13515 415 aa20.71■□□□□ 0.91
PTPN11-204ENST00000531326 STXBP2Q15833 593 aa20.71■□□□□ 0.91
PTPN11-204ENST00000531326 PTGISQ16647 500 aa20.71■□□□□ 0.91
PTPN11-204ENST00000531326 GDF6Q6KF10 455 aaPredicted RBP20.71■□□□□ 0.91
PTPN11-204ENST00000531326 DHX32Q7L7V1 743 aaKnown RBP20.71■□□□□ 0.91
PTPN11-204ENST00000531326 IL17RAQ96F46 866 aa20.71■□□□□ 0.91
PTPN11-204ENST00000531326 SLC9A7Q96T83 725 aa20.71■□□□□ 0.91
PTPN11-204ENST00000531326 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
PTPN11-204ENST00000531326 TNFRSF10AO00220 468 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 RFXAPO00287 272 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 SH2B2O14492 632 aaPredicted RBP20.7■□□□□ 0.9
PTPN11-204ENST00000531326 DHX16O60231 1041 aaKnown RBP20.7■□□□□ 0.9
PTPN11-204ENST00000531326 ARHGEF15O94989 841 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 HMGB1P09429 215 aaKnown RBP20.7■□□□□ 0.9
PTPN11-204ENST00000531326 CPA1P15085 419 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 ANAPC15P60006 121 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 GPNMBQ14956 572 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 SART3Q15020 963 aaKnown RBP20.7■□□□□ 0.9
PTPN11-204ENST00000531326 IFIT1BQ5T764 474 aaKnown RBP20.7■□□□□ 0.9
PTPN11-204ENST00000531326 SESTD1Q86VW0 696 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 DHX38Q92620 1227 aaKnown RBP20.7■□□□□ 0.9
PTPN11-204ENST00000531326 TMEM87BQ96K49 555 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 TCEANC2Q96MN5 208 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 FTOQ9C0B1 505 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTPN11-204ENST00000531326 LY9Q9HBG7 655 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 PXMP2Q9NR77 195 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 DDX41Q9UJV9 622 aaKnown RBP20.7■□□□□ 0.9
PTPN11-204ENST00000531326 NOD1Q9Y239 953 aa20.7■□□□□ 0.9
PTPN11-204ENST00000531326 MYH7BA7E2Y1 1941 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 ERICH2A1L162 156 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 EPOPA6NHQ4 379 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 RBAK-RBAKDNI3L0D1 243 aa20.69■□□□□ 0.9
PTPN11-204ENST00000531326 PPP1R11O60927 126 aaPredicted RBP20.69■□□□□ 0.9
PTPN11-204ENST00000531326 CFBP00751 764 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms