RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 CYBAP13498 195 aa16.02■□□□□ 0.16
USF1-209ENST00000529476 CCND3P30281 292 aaPredicted RBP16.02■□□□□ 0.16
USF1-209ENST00000529476 MTFR1Q15390 333 aa16.02■□□□□ 0.16
USF1-209ENST00000529476 FBXO16Q8IX29 292 aaPredicted RBP16.02■□□□□ 0.16
USF1-209ENST00000529476 KATNBL1Q9H079 304 aa16.02■□□□□ 0.16
USF1-209ENST00000529476 ZHX1Q9UKY1 873 aaPredicted RBP16.02■□□□□ 0.16
USF1-209ENST00000529476 KIF3AQ9Y496 699 aa16.02■□□□□ 0.16
USF1-209ENST00000529476 RANBP2P49792 3224 aaKnown RBP16.02■□□□□ 0.16
USF1-209ENST00000529476 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
USF1-209ENST00000529476 CCND2P30279 289 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 KRT2P35908 639 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 ACVR2BQ13705 512 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 VSIG10LQ86VR7 867 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 FBXO18Q8NFZ0 1043 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 DPF3Q92784 378 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 UNC93B1Q9H1C4 597 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 ABHD16BQ9H3Z7 469 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 EHMT1Q9H9B1 1298 aa16.01■□□□□ 0.15
USF1-209ENST00000529476 COL6A3P12111 3177 aa16■□□□□ 0.15
USF1-209ENST00000529476 BTBD18B2RXH4 712 aa16■□□□□ 0.15
USF1-209ENST00000529476 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
USF1-209ENST00000529476 CCL5P13501 91 aa16■□□□□ 0.15
USF1-209ENST00000529476 CNGA1P29973 690 aa16■□□□□ 0.15
USF1-209ENST00000529476 SREBF1P36956 1147 aa16■□□□□ 0.15
USF1-209ENST00000529476 MRPS9P82933 396 aaKnown RBP16■□□□□ 0.15
USF1-209ENST00000529476 NR5A1Q13285 461 aa16■□□□□ 0.15
USF1-209ENST00000529476 STXBP2Q15833 593 aa16■□□□□ 0.15
USF1-209ENST00000529476 PCNX4Q63HM2 1172 aa16■□□□□ 0.15
USF1-209ENST00000529476 MCTP2Q6DN12 878 aa16■□□□□ 0.15
USF1-209ENST00000529476 DIS3L2Q8IYB7 885 aaKnown RBP16■□□□□ 0.15
USF1-209ENST00000529476 SPRYD3Q8NCJ5 442 aa16■□□□□ 0.15
USF1-209ENST00000529476 BRMS1Q9HCU9 246 aa16■□□□□ 0.15
USF1-209ENST00000529476 HMX1Q9NP08 348 aaPredicted RBP16■□□□□ 0.15
USF1-209ENST00000529476 VTA1Q9NP79 307 aa16■□□□□ 0.15
USF1-209ENST00000529476 PDGFCQ9NRA1 345 aa16■□□□□ 0.15
USF1-209ENST00000529476 NRBP1Q9UHY1 535 aa16■□□□□ 0.15
USF1-209ENST00000529476 EIF3JO75822 258 aaKnown RBP15.99■□□□□ 0.15
USF1-209ENST00000529476 BECN1Q14457 450 aa15.99■□□□□ 0.15
USF1-209ENST00000529476 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
USF1-209ENST00000529476 TAPT1Q6NXT6 567 aa15.99■□□□□ 0.15
USF1-209ENST00000529476 KRT25Q7Z3Z0 450 aa15.99■□□□□ 0.15
USF1-209ENST00000529476 TNFRSF25Q93038 417 aa15.99■□□□□ 0.15
USF1-209ENST00000529476 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.99■□□□□ 0.15
USF1-209ENST00000529476 RTEL1Q9NZ71 1219 aa15.99■□□□□ 0.15
USF1-209ENST00000529476 FRMPD3Q5JV73 1810 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 A0A0C4DFX4 3053 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 CCDC194A0A1B0GVG4 234 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 FAM205CA6NFA0 338 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 SOX1O00570 391 aaPredicted RBP15.98■□□□□ 0.15
USF1-209ENST00000529476 RGS20O76081 388 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 ADCYAP1R1P41586 468 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 ARHGAP4P98171 946 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 SAFBQ15424 915 aaKnown RBP eCLIP15.98■□□□□ 0.15
USF1-209ENST00000529476 CCDC144BQ3MJ40 725 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 EARS2Q5JPH6 523 aaKnown RBP15.98■□□□□ 0.15
USF1-209ENST00000529476 XRRA1Q6P2D8 792 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 SEPT14Q6ZU15 432 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 CRYGNQ8WXF5 182 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 RNF208Q9H0X6 261 aa15.98■□□□□ 0.15
USF1-209ENST00000529476 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.97■□□□□ 0.15
USF1-209ENST00000529476 KIF28PB7ZC32 967 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 H3BQV1 296 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 SEPT4O43236 478 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 ADCY6O43306 1168 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 EDIL3O43854 480 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 NONOQ15233 471 aaKnown RBP eCLIP15.97■□□□□ 0.15
USF1-209ENST00000529476 INF2Q27J81 1249 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 TMEM63BQ5T3F8 832 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 ANO1Q5XXA6 986 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 PIK3AP1Q6ZUJ8 805 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 TBCKQ8TEA7 893 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 LENG1Q96BZ8 264 aaPredicted RBP15.97■□□□□ 0.15
USF1-209ENST00000529476 PAK6Q9NQU5 681 aaPredicted RBP15.97■□□□□ 0.15
USF1-209ENST00000529476 FAM184BQ9ULE4 1060 aa15.97■□□□□ 0.15
USF1-209ENST00000529476 RBM47A0AV96 593 aaKnown RBP15.96■□□□□ 0.15
USF1-209ENST00000529476 STAM2O75886 525 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 ARIH2O95376 493 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 CYP3A4P08684 503 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 AKR1A1P14550 325 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 ITGB5P18084 799 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 PTGS1P23219 599 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 CYP2W1Q8TAV3 490 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 INPP4AQ96PE3 977 aaPredicted RBP15.96■□□□□ 0.15
USF1-209ENST00000529476 WDR11Q9BZH6 1224 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 DDX20Q9UHI6 824 aaKnown RBP15.96■□□□□ 0.15
USF1-209ENST00000529476 UBIAD1Q9Y5Z9 338 aa15.96■□□□□ 0.15
USF1-209ENST00000529476 SMPD1P17405 629 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 PDCP20941 246 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 SYT1P21579 422 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 ZNF76P36508 570 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
USF1-209ENST00000529476 TNFAIP2Q03169 654 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 GNL2Q13823 731 aaKnown RBP15.95■□□□□ 0.14
USF1-209ENST00000529476 GJC2Q5T442 439 aaPredicted RBP15.95■□□□□ 0.14
USF1-209ENST00000529476 LHX8Q68G74 356 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 MCTP1Q6DN14 999 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 IQSEC1Q6DN90 963 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 UBE2Q1Q7Z7E8 422 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 SCFD2Q8WU76 684 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 LRCH3Q96II8 777 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms