RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ARHGAP4P98171 946 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 STX1AQ16623 288 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 ANKRD35Q8N283 1001 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 ZNF579Q8NAF0 562 aaKnown RBP21.26■□□□□ 0.99
SMPD1-203ENST00000527275 ERCC4Q92889 916 aaPredicted RBP21.26■□□□□ 0.99
SMPD1-203ENST00000527275 EFCC1Q9HA90 598 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 CPA4Q9UI42 421 aa21.26■□□□□ 0.99
SMPD1-203ENST00000527275 RBBP6Q7Z6E9 1792 aaKnown RBP21.25■□□□□ 0.99
SMPD1-203ENST00000527275 BMP15O95972 392 aa21.25■□□□□ 0.99
SMPD1-203ENST00000527275 UBXN2AP68543 259 aa21.25■□□□□ 0.99
SMPD1-203ENST00000527275 GRIN1Q05586 938 aa21.25■□□□□ 0.99
SMPD1-203ENST00000527275 TAAR1Q96RJ0 339 aa21.25■□□□□ 0.99
SMPD1-203ENST00000527275 KIAA1468Q9P260 1216 aa21.25■□□□□ 0.99
SMPD1-203ENST00000527275 KCNH3Q9ULD8 1083 aa21.25■□□□□ 0.99
SMPD1-203ENST00000527275 TDP2O95551 362 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 ZNF165P49910 485 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 USP11P51784 963 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 CCNA1P78396 465 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 FAM110CQ1W6H9 321 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 SPECC1Q5M775 1068 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 WDR78Q5VTH9 848 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 LUZP1Q86V48 1076 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 MROH8Q9H579 483 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 TLR2O60603 784 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 COPB2P35606 906 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 PTGDRQ13258 359 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 FAM13BQ9NYF5 915 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 ADGRA2Q96PE1 1338 aa21.24■□□□□ 0.99
SMPD1-203ENST00000527275 CRHR2Q13324 411 aa21.23■□□□□ 0.99
SMPD1-203ENST00000527275 SHCBP1Q8NEM2 672 aa21.23■□□□□ 0.99
SMPD1-203ENST00000527275 RMDN3Q96TC7 470 aa21.23■□□□□ 0.99
SMPD1-203ENST00000527275 ANO10Q9NW15 660 aa21.23■□□□□ 0.99
SMPD1-203ENST00000527275 CEP350Q5VT06 3117 aa21.23■□□□□ 0.99
SMPD1-203ENST00000527275 PFASO15067 1338 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 ADCY5O95622 1261 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 BCRP11274 1271 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 VEGFBP49765 207 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 PPP4R3AQ6IN85 833 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 MAF1Q9H063 256 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 CSRNP2Q9H175 543 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 ZFYVE28Q9HCC9 887 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 RPTORQ8N122 1335 aa21.22■□□□□ 0.99
SMPD1-203ENST00000527275 SLC37A4O43826 429 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 EIF2AK2P19525 551 aaKnown RBP21.21■□□□□ 0.99
SMPD1-203ENST00000527275 ATP2C1P98194 919 aaPredicted RBP21.21■□□□□ 0.99
SMPD1-203ENST00000527275 PLCB2Q00722 1185 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 C4orf32Q8N8J7 132 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 TMEM60Q9H2L4 133 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 EHMT1Q9H9B1 1298 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 FAM86B1E9PN63 330 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 NEMFO60524 1076 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 CYP3A4P08684 503 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 FAM86B2P0C5J1 330 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 CNTN2Q02246 1040 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 LONRF3Q496Y0 759 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 C17orf99Q6UX52 265 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 C11orf57Q6ZUT1 292 aaPredicted RBP21.21■□□□□ 0.99
SMPD1-203ENST00000527275 IL31RAQ8NI17 732 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 FERMT2Q96AC1 680 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 ZFP91Q96JP5 570 aaPredicted RBP21.21■□□□□ 0.99
SMPD1-203ENST00000527275 PXMP2Q9NR77 195 aa21.21■□□□□ 0.99
SMPD1-203ENST00000527275 DDX25Q9UHL0 483 aaKnown RBP21.21■□□□□ 0.99
SMPD1-203ENST00000527275 A0A087WWV3 80 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 CA12O43570 354 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 FCER1AP12319 257 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 KCTD2Q14681 263 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 ZRSR1Q15695 479 aaKnown RBP21.2■□□□□ 0.98
SMPD1-203ENST00000527275 KRBA2Q6ZNG9 492 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.2■□□□□ 0.98
SMPD1-203ENST00000527275 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 CYP2W1Q8TAV3 490 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 CYP3A7-CYP3A51PA0A087WV96 503 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 PGK2P07205 417 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 GCFC2P16383 781 aaKnown RBP21.2■□□□□ 0.98
SMPD1-203ENST00000527275 CYP3A7P24462 503 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 HS1BP3Q53T59 392 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 ARHGEF16Q5VV41 709 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 CNNM3Q8NE01 707 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 MMP19Q99542 508 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 PDCD2LQ9BRP1 358 aa21.2■□□□□ 0.98
SMPD1-203ENST00000527275 FRMPD4Q14CM0 1322 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 AP5Z1O43299 807 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 ALDH1A1P00352 501 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 CIITAP33076 1130 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 ZNF76P36508 570 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 PGM5Q15124 567 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 REM2Q8IYK8 340 aaPredicted RBP21.19■□□□□ 0.98
SMPD1-203ENST00000527275 NSUN6Q8TEA1 469 aaKnown RBP21.19■□□□□ 0.98
SMPD1-203ENST00000527275 ASTN1O14525 1302 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 POTEB2H3BUK9 544 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 ORC2Q13416 577 aaPredicted RBP21.19■□□□□ 0.98
SMPD1-203ENST00000527275 IQCB1Q15051 598 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 PRR16Q569H4 304 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 MOXD1Q6UVY6 613 aa21.19■□□□□ 0.98
SMPD1-203ENST00000527275 NAP1L4Q99733 375 aaKnown RBP21.19■□□□□ 0.98
SMPD1-203ENST00000527275 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
SMPD1-203ENST00000527275 LCTP09848 1927 aa21.18■□□□□ 0.98
SMPD1-203ENST00000527275 POLR2DO15514 142 aaKnown RBP21.18■□□□□ 0.98
SMPD1-203ENST00000527275 ECM2O94769 699 aaPredicted RBP21.18■□□□□ 0.98
SMPD1-203ENST00000527275 MAP2K2P36507 400 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms