RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 DDX41Q9UJV9 622 aaKnown RBP15.53■□□□□ 0.08
CAPN1-207ENST00000527189 GCOM1H8Y6P7 765 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-207ENST00000527189 POLR2MP0CAP2 368 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 TGFB3P10600 412 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 EIF2AK2P19525 551 aaKnown RBP15.52■□□□□ 0.08
CAPN1-207ENST00000527189 CASTP20810 708 aaKnown RBP15.52■□□□□ 0.08
CAPN1-207ENST00000527189 LIFRP42702 1097 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 GNAQP50148 359 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 LY6KQ17RY6 165 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 SLC35G1Q2M3R5 365 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 NBPF20Q3BBV1 942 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 ZNF365Q70YC5 407 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 VSIG10LQ86VR7 867 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 HOMER1Q86YM7 354 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 CTCFLQ8NI51 663 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-207ENST00000527189 HERVK_113Q902F9 699 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 PDCD2LQ9BRP1 358 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.08
CAPN1-207ENST00000527189 SLC27A2O14975 620 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 PRC1O43663 620 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 FGBP02675 491 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 CALM1P0DP23 149 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 CALM2P0DP24 149 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 CALM3P0DP25 149 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 ARHGAP1Q07960 439 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 LAMC2Q13753 1193 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 RNF20Q5VTR2 975 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 ZNF654Q8IZM8 581 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 AFG1LQ8WV93 481 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 MRVI1Q9Y6F6 885 aa15.51■□□□□ 0.07
CAPN1-207ENST00000527189 SCN10AQ9Y5Y9 1956 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 CCDC69A6NI79 296 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 STAM2O75886 525 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 PFKMP08237 780 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 MMP3P08254 477 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 PGM5Q15124 567 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 DGKDQ16760 1214 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 CREB3L3Q68CJ9 461 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 SESTD1Q86VW0 696 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 RRP36Q96EU6 259 aaKnown RBP15.5■□□□□ 0.07
CAPN1-207ENST00000527189 ANO2Q9NQ90 1003 aa15.5■□□□□ 0.07
CAPN1-207ENST00000527189 TRMT13Q9NUP7 481 aaKnown RBP15.5■□□□□ 0.07
CAPN1-207ENST00000527189 KIAA1217Q5T5P2 1943 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-207ENST00000527189 PPFIA4O75335 1185 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 ACRP10323 421 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 MYCLP12524 364 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-207ENST00000527189 CCND2P30279 289 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 HOXA13P31271 388 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-207ENST00000527189 RFC2P35250 354 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 CCL23P55773 120 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 NFXL1Q6ZNB6 911 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 DHX37Q8IY37 1157 aaKnown RBP15.49■□□□□ 0.07
CAPN1-207ENST00000527189 PPTC7Q8NI37 304 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 CDX2Q99626 313 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-207ENST00000527189 KATNAL1Q9BW62 490 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 WNT8AQ9H1J5 351 aa15.49■□□□□ 0.07
CAPN1-207ENST00000527189 TTYH1Q9H313 450 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-207ENST00000527189 UMODL1Q5DID0 1318 aa15.48■□□□□ 0.07
CAPN1-207ENST00000527189 RGS20O76081 388 aa15.48■□□□□ 0.07
CAPN1-207ENST00000527189 DNAJB2P25686 324 aa15.48■□□□□ 0.07
CAPN1-207ENST00000527189 BFSP2Q13515 415 aa15.48■□□□□ 0.07
CAPN1-207ENST00000527189 TSGA10IPQ3SY00 556 aa15.48■□□□□ 0.07
CAPN1-207ENST00000527189 SGMS1Q86VZ5 419 aa15.48■□□□□ 0.07
CAPN1-207ENST00000527189 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
CAPN1-207ENST00000527189 SEC63Q9UGP8 760 aaKnown RBP15.48■□□□□ 0.07
CAPN1-207ENST00000527189 SLC12A7Q9Y666 1083 aa15.48■□□□□ 0.07
CAPN1-207ENST00000527189 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
CAPN1-207ENST00000527189 PIK3CDO00329 1044 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 CYP2C9P11712 490 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 HOXD8P13378 290 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-207ENST00000527189 GNPTABQ3T906 1256 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 CELF3Q5SZQ8 465 aaKnown RBP15.47■□□□□ 0.07
CAPN1-207ENST00000527189 MYSM1Q5VVJ2 828 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 XRRA1Q6P2D8 792 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 FCHSD1Q86WN1 690 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 MAFAQ8NHW3 353 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-207ENST00000527189 KAT2BQ92831 832 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 CUL5Q93034 780 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 NOD1Q9Y239 953 aa15.47■□□□□ 0.07
CAPN1-207ENST00000527189 FRMPD4Q14CM0 1322 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 IQCF3P0C7M6 154 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 ICAM3P32942 547 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 PLA2G5P39877 138 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 RAB30Q15771 203 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 PTGISQ16647 500 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 SYNE3Q6ZMZ3 975 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 SRBD1Q8N5C6 995 aaKnown RBP15.46■□□□□ 0.07
CAPN1-207ENST00000527189 CCDC155Q8N6L0 562 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 FANCBQ8NB91 859 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 CAGE1Q8TC20 777 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 TIFAQ96CG3 184 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 NEK1Q96PY6 1258 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 MYL10Q9BUA6 226 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 ZNF576Q9H609 170 aa15.46■□□□□ 0.07
CAPN1-207ENST00000527189 HAS3O00219 553 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 CDC45O75419 566 aa15.45■□□□□ 0.06
CAPN1-207ENST00000527189 PARNO95453 639 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms