RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DIS3L2Q8IYB7 885 aaKnown RBP12.33□□□□□ -0.44
NEDD8-205ENST00000527046 REXO1Q8N1G1 1221 aaKnown RBP12.33□□□□□ -0.44
NEDD8-205ENST00000527046 C8orf76Q96K31 380 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 GLT8D2Q9H1C3 349 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 UNC93B1Q9H1C4 597 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 ABHD16BQ9H3Z7 469 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 NRBP1Q9UHY1 535 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 RBM19Q9Y4C8 960 aaKnown RBP12.33□□□□□ -0.44
NEDD8-205ENST00000527046 IGLV3-22A0A075B6J6 115 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 CTAGE5O15320 804 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 EIF3JO75822 258 aaKnown RBP12.32□□□□□ -0.44
NEDD8-205ENST00000527046 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 MYCLP12524 364 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-205ENST00000527046 CIITAP33076 1130 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-205ENST00000527046 ARHGAP4P98171 946 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 STXBP2Q15833 593 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 MFSD14CQ5VZR4 134 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 LARP1BQ659C4 914 aaKnown RBP12.32□□□□□ -0.44
NEDD8-205ENST00000527046 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-205ENST00000527046 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 LENG9Q96B70 501 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 MBOAT7Q96N66 472 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 INPP4AQ96PE3 977 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-205ENST00000527046 PAK6Q9NQU5 681 aaPredicted RBP12.32□□□□□ -0.44
NEDD8-205ENST00000527046 RTEL1Q9NZ71 1219 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 ZDHHC9Q9Y397 364 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 TELO2Q9Y4R8 837 aa12.32□□□□□ -0.44
NEDD8-205ENST00000527046 CYP3A7-CYP3A51PA0A087WV96 503 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 SPDYE3A6NKU9 549 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 MEIS1O00470 390 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 ATP9AO75110 1047 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 ARP10275 920 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 SMPD1P17405 629 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 CYP3A7P24462 503 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 KRT2P35908 639 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 ADCYAP1R1P41586 468 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-205ENST00000527046 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-205ENST00000527046 PKP1Q13835 747 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 INF2Q27J81 1249 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 CCDC144BQ3MJ40 725 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 SLC9C1Q4G0N8 1177 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 BICD2Q8TD16 824 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 TBCKQ8TEA7 893 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 WDR11Q9BZH6 1224 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
NEDD8-205ENST00000527046 VTA1Q9NP79 307 aa12.31□□□□□ -0.44
NEDD8-205ENST00000527046 DDX41Q9UJV9 622 aaKnown RBP12.31□□□□□ -0.44
NEDD8-205ENST00000527046 GNEQ9Y223 722 aaKnown RBP12.31□□□□□ -0.44
NEDD8-205ENST00000527046 SPATA31C2B4DYI2 1134 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 CCL5P13501 91 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 XBP1P17861 261 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 ICAM3P32942 547 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 USP11P51784 963 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 NKX3-2P78367 333 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 PDE4DQ08499 809 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 GJC2Q5T442 439 aaPredicted RBP12.3□□□□□ -0.44
NEDD8-205ENST00000527046 IQSEC1Q6DN90 963 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 XRRA1Q6P2D8 792 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 SEPT14Q6ZU15 432 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 PIK3AP1Q6ZUJ8 805 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 COPS5Q92905 334 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 LENG1Q96BZ8 264 aaPredicted RBP12.3□□□□□ -0.44
NEDD8-205ENST00000527046 MXRA8Q9BRK3 442 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 HMX1Q9NP08 348 aaPredicted RBP12.3□□□□□ -0.44
NEDD8-205ENST00000527046 JADE2Q9NQC1 790 aa12.3□□□□□ -0.44
NEDD8-205ENST00000527046 DHX15O43143 795 aaKnown RBP12.29□□□□□ -0.44
NEDD8-205ENST00000527046 SEPT4O43236 478 aa12.29□□□□□ -0.44
NEDD8-205ENST00000527046 MYCP01106 439 aaPredicted RBP12.29□□□□□ -0.44
NEDD8-205ENST00000527046 CCND2P30279 289 aa12.29□□□□□ -0.44
NEDD8-205ENST00000527046 NONOQ15233 471 aaKnown RBP eCLIP12.29□□□□□ -0.44
NEDD8-205ENST00000527046 LY6KQ17RY6 165 aa12.29□□□□□ -0.44
NEDD8-205ENST00000527046 ANO1Q5XXA6 986 aa12.29□□□□□ -0.44
NEDD8-205ENST00000527046 MCTP2Q6DN12 878 aa12.29□□□□□ -0.44
NEDD8-205ENST00000527046 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
NEDD8-205ENST00000527046 KRT25Q7Z3Z0 450 aa12.29□□□□□ -0.44
NEDD8-205ENST00000527046 CRISPLD2Q9H0B8 497 aa12.29□□□□□ -0.44
NEDD8-205ENST00000527046 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.29□□□□□ -0.44
NEDD8-205ENST00000527046 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
NEDD8-205ENST00000527046 FRMPD3Q5JV73 1810 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 ADAMTS4O75173 837 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 TDP2O95551 362 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 RESTQ13127 1097 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 DUSP28Q4G0W2 176 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 NOSTRINQ8IVI9 506 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 C4orf32Q8N8J7 132 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 ABHD8Q96I13 439 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 KCNH7Q9NS40 1196 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 DDX20Q9UHI6 824 aaKnown RBP12.28□□□□□ -0.44
NEDD8-205ENST00000527046 ZHX1Q9UKY1 873 aaPredicted RBP12.28□□□□□ -0.44
NEDD8-205ENST00000527046 FAM184BQ9ULE4 1060 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
NEDD8-205ENST00000527046 MYADML2A6NDP7 307 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 STX6O43752 255 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 SLC37A4O43826 429 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms