RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 SNX12Q9UMY4 172 aa16.28■□□□□ 0.2
LTBP3-204ENST00000525443 ZNF510Q9Y2H8 683 aa16.28■□□□□ 0.2
LTBP3-204ENST00000525443 IGF2BP3O00425 579 aaKnown RBP eCLIP16.27■□□□□ 0.2
LTBP3-204ENST00000525443 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
LTBP3-204ENST00000525443 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
LTBP3-204ENST00000525443 SP100P23497 879 aaPredicted RBP16.27■□□□□ 0.2
LTBP3-204ENST00000525443 MRPS35P82673 323 aaKnown RBP16.27■□□□□ 0.2
LTBP3-204ENST00000525443 SFSWAPQ12872 951 aaKnown RBP16.27■□□□□ 0.2
LTBP3-204ENST00000525443 DYNC1I2Q13409 638 aaKnown RBP16.27■□□□□ 0.2
LTBP3-204ENST00000525443 RASA3Q14644 834 aa16.27■□□□□ 0.2
LTBP3-204ENST00000525443 PROCA1Q8NCQ7 364 aaPredicted RBP16.27■□□□□ 0.2
LTBP3-204ENST00000525443 RHBDL2Q9NX52 303 aa16.27■□□□□ 0.2
LTBP3-204ENST00000525443 SYNRGQ9UMZ2 1314 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 GCOM1H8Y6P7 765 aaPredicted RBP16.27■□□□□ 0.19
LTBP3-204ENST00000525443 SMAPO00193 183 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 POLR2DO15514 142 aaKnown RBP16.27■□□□□ 0.19
LTBP3-204ENST00000525443 GSTA1P08263 222 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 KRT16P08779 473 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 MYZAPP0CAP1 466 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 Q4G0T1 1027 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 MEX3CQ5U5Q3 659 aaKnown RBP16.27■□□□□ 0.19
LTBP3-204ENST00000525443 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 LMNTD2Q8IXW0 634 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 MARCH10Q8NA82 808 aaPredicted RBP16.27■□□□□ 0.19
LTBP3-204ENST00000525443 KBTBD3Q8NAB2 608 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 DYDC1Q8WWB3 177 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 KIFAP3Q92845 792 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 CDCA7Q9BWT1 371 aaPredicted RBP16.27■□□□□ 0.19
LTBP3-204ENST00000525443 RBM12Q9NTZ6 932 aaKnown RBP16.27■□□□□ 0.19
LTBP3-204ENST00000525443 ADAM22Q9P0K1 906 aa16.27■□□□□ 0.19
LTBP3-204ENST00000525443 ZMYND8Q9ULU4 1186 aaPredicted RBP16.27■□□□□ 0.19
LTBP3-204ENST00000525443 DCDC2CA8MYV0 355 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 SETDB1Q15047 1291 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 PTPAQ15257 358 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 ZRSR2Q15696 482 aaKnown RBP16.26■□□□□ 0.19
LTBP3-204ENST00000525443 TSHZ1Q6ZSZ6 1077 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 MDM1Q8TC05 714 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 MIPOL1Q8TD10 442 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 FGD4Q96M96 766 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 AIFM3Q96NN9 605 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 NDNQ99608 321 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 GREM2Q9H772 168 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 DISP2A7MBM2 1401 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 SH3TC1Q8TE82 1336 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 ITGA6P23229 1130 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 EIF4BP23588 611 aaKnown RBP16.26■□□□□ 0.19
LTBP3-204ENST00000525443 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 PABPC1LQ4VXU2 614 aaKnown RBP16.26■□□□□ 0.19
LTBP3-204ENST00000525443 METTL24Q5JXM2 366 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 IFT20Q8IY31 132 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 RUBCNQ92622 972 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 JCADQ9P266 1359 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 ANO9A1A5B4 782 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 ADORA1P30542 326 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 PPP2R2AP63151 447 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 TTC39AQ5SRH9 613 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 SFMBT2Q5VUG0 894 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 OPTNQ96CV9 577 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 CTAGE1Q96RT6 745 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 ABCF3Q9NUQ8 709 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 TAB2Q9NYJ8 693 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 LNPEPQ9UIQ6 1025 aa16.26■□□□□ 0.19
LTBP3-204ENST00000525443 ORC4O43929 436 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 HEXIM1O94992 359 aaKnown RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 SARSP49591 514 aaKnown RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 CYP27A1Q02318 531 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 ANKS4BQ8N8V4 417 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 NGLY1Q96IV0 654 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 TSPAN18Q96SJ8 248 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 NOVA2Q9UNW9 492 aaKnown RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 ITIH6Q6UXX5 1313 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 IFIT3O14879 490 aaKnown RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 PPP6R2O75170 966 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 CIAO1O76071 339 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 VIMP08670 466 aaKnown RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 HMGB1P09429 215 aaKnown RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 ERCC5P28715 1186 aaPredicted RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 CASP1P29466 404 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 IL6STP40189 918 aaPredicted RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 GRIN1Q05586 938 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 KRT31Q15323 416 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 IFI16Q16666 785 aaKnown RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 FAM98CQ17RN3 349 aaKnown RBP16.25■□□□□ 0.19
LTBP3-204ENST00000525443 CDKAL1Q5VV42 579 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 FOXB2Q5VYV0 432 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 C8orf37Q96NL8 207 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 GPR108Q9NPR9 543 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 LAMB4A4D0S4 1761 aa16.25■□□□□ 0.19
LTBP3-204ENST00000525443 FAM237AA0A1B0GTK4 181 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 KCNQ2O43526 872 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 UBOX5O94941 541 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 NCALDP61601 193 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 SLC17A8Q8NDX2 589 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 CHMP6Q96FZ7 201 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 ABCF2Q9UG63 623 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 MYH7P12883 1935 aa16.24■□□□□ 0.19
LTBP3-204ENST00000525443 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms