RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 IGDCC4Q8TDY8 1250 aa19.51■□□□□ 0.71
SPIDR-221ENST00000523814 PPP1R13LQ8WUF5 828 aa19.51■□□□□ 0.71
SPIDR-221ENST00000523814 KAT2BQ92831 832 aa19.51■□□□□ 0.71
SPIDR-221ENST00000523814 SLC4A7Q9Y6M7 1214 aa19.51■□□□□ 0.71
SPIDR-221ENST00000523814 PNMA6FA0A0J9YX94 578 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 CYTH3O43739 400 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 RFC2P35250 354 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 LAMC2Q13753 1193 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 DGKDQ16760 1214 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 CHST3Q7LGC8 479 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 SESTD1Q86VW0 696 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 RETREG2Q8NC44 543 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 PIGSQ96S52 555 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 PDCD2LQ9BRP1 358 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 COL25A1Q9BXS0 654 aaPredicted RBP19.5■□□□□ 0.71
SPIDR-221ENST00000523814 CUL9Q8IWT3 2517 aa19.5■□□□□ 0.71
SPIDR-221ENST00000523814 RGS20O76081 388 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 IQCF3P0C7M6 154 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 HOXA13P31271 388 aaPredicted RBP19.49■□□□□ 0.71
SPIDR-221ENST00000523814 ANTXR2P58335 489 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 BFSP2Q13515 415 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 TMEM67Q5HYA8 995 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 KCNV1Q6PIU1 500 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 HOMER1Q86YM7 354 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 YBX2Q9Y2T7 364 aaKnown RBP19.49■□□□□ 0.71
SPIDR-221ENST00000523814 MRVI1Q9Y6F6 885 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 CHD9Q3L8U1 2897 aa19.49■□□□□ 0.71
SPIDR-221ENST00000523814 GCOM1H8Y6P7 765 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-221ENST00000523814 POLR2MP0CAP2 368 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 PTGISQ16647 500 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 DEFB128Q7Z7B8 93 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 CATIPQ7Z7H3 387 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 MB21D2Q8IYB1 491 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-221ENST00000523814 PPTC7Q8NI37 304 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 CTAGE1Q96RT6 745 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 MAP3K14Q99558 947 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 SLC28A3Q9HAS3 691 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 NOD1Q9Y239 953 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 RBM8AQ9Y5S9 174 aaKnown RBP19.48■□□□□ 0.71
SPIDR-221ENST00000523814 MYH6P13533 1939 aa19.48■□□□□ 0.71
SPIDR-221ENST00000523814 PPFIA4O75335 1185 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 TGFB3P10600 412 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 MYCLP12524 364 aaPredicted RBP19.47■□□□□ 0.71
SPIDR-221ENST00000523814 HOXD8P13378 290 aaPredicted RBP19.47■□□□□ 0.71
SPIDR-221ENST00000523814 ATP2A2P16615 1042 aaKnown RBP19.47■□□□□ 0.71
SPIDR-221ENST00000523814 CHMP4BP1P59074 171 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 PGM5Q15124 567 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 MYSM1Q5VVJ2 828 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 GDF6Q6KF10 455 aaPredicted RBP19.47■□□□□ 0.71
SPIDR-221ENST00000523814 DHX37Q8IY37 1157 aaKnown RBP19.47■□□□□ 0.71
SPIDR-221ENST00000523814 MTA3Q9BTC8 594 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 NKX2-4Q9H2Z4 354 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 PRDM12Q9H4Q4 367 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 PCDHA11Q9Y5I1 949 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 PRUNE2Q8WUY3 3088 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 KIAA1217Q5T5P2 1943 aa19.47■□□□□ 0.71
SPIDR-221ENST00000523814 ZBBXA8MT70 800 aa19.46■□□□□ 0.71
SPIDR-221ENST00000523814 ACTN1P12814 892 aa19.46■□□□□ 0.71
SPIDR-221ENST00000523814 RABGGTBP53611 331 aa19.46■□□□□ 0.71
SPIDR-221ENST00000523814 CELF3Q5SZQ8 465 aaKnown RBP19.46■□□□□ 0.71
SPIDR-221ENST00000523814 IL31RAQ8NI17 732 aa19.46■□□□□ 0.71
SPIDR-221ENST00000523814 CAGE1Q8TC20 777 aa19.46■□□□□ 0.71
SPIDR-221ENST00000523814 GAS2L1Q99501 681 aaPredicted RBP19.46■□□□□ 0.71
SPIDR-221ENST00000523814 HAS3O00219 553 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 SMARCA1P28370 1054 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 CCND2P30279 289 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 PSEN2P49810 448 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 SP2Q02086 613 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 FCHSD1Q86WN1 690 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 CCDC155Q8N6L0 562 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 C7orf31Q8N865 590 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 AFAP1L1Q8TED9 768 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 KATNAL1Q9BW62 490 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 LY9Q9HBG7 655 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 GTF2IRD1Q9UHL9 959 aa19.45■□□□□ 0.7
SPIDR-221ENST00000523814 F2P00734 622 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 MYOGP15173 224 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 RBL2Q08999 1139 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 ADGRE1Q14246 886 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 TMTC2Q8N394 836 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 USP38Q8NB14 1042 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 PHOSPHO2Q8TCD6 241 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 SPZ1Q9BXG8 430 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 FTOQ9C0B1 505 aaKnown RBP eCLIP19.44■□□□□ 0.7
SPIDR-221ENST00000523814 LSG1Q9H089 658 aaKnown RBP19.44■□□□□ 0.7
SPIDR-221ENST00000523814 HDAC6Q9UBN7 1215 aa19.44■□□□□ 0.7
SPIDR-221ENST00000523814 DDAH1O94760 285 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 SELPP16109 830 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 KIF5BP33176 963 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 MFSD10Q14728 455 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 GPNMBQ14956 572 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 KIAA0753Q2KHM9 967 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 HSDL1Q3SXM5 330 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 ZNF654Q8IZM8 581 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 DHX38Q92620 1227 aaKnown RBP19.43■□□□□ 0.7
SPIDR-221ENST00000523814 SPATA33Q96N06 139 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 LZTS2Q9BRK4 669 aa19.43■□□□□ 0.7
SPIDR-221ENST00000523814 PRC1O43663 620 aa19.42■□□□□ 0.7
SPIDR-221ENST00000523814 STAM2O75886 525 aa19.42■□□□□ 0.7
SPIDR-221ENST00000523814 PARNO95453 639 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms