RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 KIRREL3Q8IZU9 778 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-212ENST00000523387 IFT74Q96LB3 600 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 MTRF1LQ9UGC7 380 aaKnown RBP9.91□□□□□ -0.82
CSMD1-212ENST00000523387 CD2APQ9Y5K6 639 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 ABCC6O95255 1503 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 PGRMC1O00264 195 aaKnown RBP9.91□□□□□ -0.82
CSMD1-212ENST00000523387 FAM153BP0C7A2 387 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 TNNI2P48788 182 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 ATP11AP98196 1134 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 FAM153CQ494X1 144 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 PPP4R3AQ6IN85 833 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 PDXDC2PQ6P474 469 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 TEX11Q8IYF3 940 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 RNF10Q8N5U6 811 aaKnown RBP9.91□□□□□ -0.82
CSMD1-212ENST00000523387 FAM133AQ8N9E0 248 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 SEC16BQ96JE7 1060 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
CSMD1-212ENST00000523387 CUEDC2Q9H467 287 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 FAM153AQ9UHL3 310 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 PCDHA4Q9UN74 947 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 BAZ2BQ9UIF8 2168 aaKnown RBP9.91□□□□□ -0.82
CSMD1-212ENST00000523387 DIP2AQ14689 1571 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 GSTTP1A0A1W2PQM5 241 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 TFAP4Q01664 338 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 STK4Q13043 487 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 CUL1Q13616 776 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 CAVIN3Q969G5 261 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 THOC1Q96FV9 657 aaKnown RBP9.91□□□□□ -0.82
CSMD1-212ENST00000523387 ISCA1Q9BUE6 129 aa9.91□□□□□ -0.82
CSMD1-212ENST00000523387 INTS9Q9NV88 658 aaKnown RBP9.91□□□□□ -0.82
CSMD1-212ENST00000523387 TMEM110-MUSTN1A8MSY1 372 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 GCFC2P16383 781 aaKnown RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 NBPF9Q3BBW0 867 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 KRT25Q7Z3Z0 450 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 DDX42Q86XP3 938 aaKnown RBP eCLIP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 MYOCDQ8IZQ8 938 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 PNMA1Q8ND90 353 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 UIMC1Q96RL1 719 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 DDX47Q9H0S4 455 aaKnown RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 MAGEF1Q9HAY2 307 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 FBXL5Q9UKA1 691 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 RAD51CO43502 376 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 NMT2O60551 498 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 FLOT1O75955 427 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 SERPING1P05155 500 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 GYG1P46976 350 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 ZFYVE27Q5T4F4 411 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 KCNV1Q6PIU1 500 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 BICDL1Q6ZP65 573 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 CASKIN2Q8WXE0 1202 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 ELAC2Q9BQ52 826 aaKnown RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 MTA3Q9BTC8 594 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 RAB17Q9H0T7 212 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 PLCB1Q9NQ66 1216 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 SPATS2LQ9NUQ6 558 aaKnown RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 PLAGL2Q9UPG8 496 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 RHOBTB3O94955 611 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 EPB41P11171 864 aaKnown RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 PCK1P35558 622 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 HERC4Q5GLZ8 1057 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 TRIM68Q6AZZ1 485 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 NLRP10Q86W26 655 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 SRBD1Q8N5C6 995 aaKnown RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 GIMAP8Q8ND71 665 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-212ENST00000523387 NKX2-3Q8TAU0 364 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 SH3GL2Q99962 352 aa9.9□□□□□ -0.82
CSMD1-212ENST00000523387 AKAP12Q02952 1782 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 RIMBP3CA6NJZ7 1639 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 RIMBP3BA6NNM3 1639 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 RIMBP3Q9UFD9 1639 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 ERVV-2B6SEH9 535 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 CETN3O15182 167 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 PRLRP16471 622 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 PLCB4Q15147 1175 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 CALCRLQ16602 461 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 MEA1Q16626 185 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 TTI2Q6NXR4 508 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 PSMD1Q99460 953 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 CNOT10Q9H9A5 744 aaKnown RBP9.9□□□□□ -0.83
CSMD1-212ENST00000523387 ARHGAP20Q9P2F6 1191 aa9.9□□□□□ -0.83
CSMD1-212ENST00000523387 CPSF2Q9P2I0 782 aaKnown RBP9.9□□□□□ -0.83
CSMD1-212ENST00000523387 GOLGA8HP0CJ92 632 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 IL2RBP14784 551 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 PFKFB3Q16875 520 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-212ENST00000523387 CCDC65Q8IXS2 484 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 ANKRD42Q8N9B4 389 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 SMCO2A6NFE2 343 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 ZNF233A6NK53 670 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 CCDC169A6NNP5 214 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 MMEP08473 750 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 NEFHP12036 1026 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 TXNRD1Q16881 649 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 AP1ARQ63HQ0 302 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 U2AF1L4Q8WU68 220 aaKnown RBP9.89□□□□□ -0.83
CSMD1-212ENST00000523387 KLHL29Q96CT2 875 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 CHMP6Q96FZ7 201 aa9.89□□□□□ -0.83
CSMD1-212ENST00000523387 ERGIC2Q96RQ1 377 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms