RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 PCDHA8Q9Y5H6 950 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 ADAMTS3O15072 1205 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 PGK1P00558 417 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 SMPD1P17405 629 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 PTGS1P23219 599 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 GNA11P29992 359 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 GJC2Q5T442 439 aaPredicted RBP13.57□□□□□ -0.24
HPS4-218ENST00000519774 REXO1Q8N1G1 1221 aaKnown RBP13.57□□□□□ -0.24
HPS4-218ENST00000519774 RASGRP4Q8TDF6 673 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 DIS3LQ8TF46 1054 aaKnown RBP13.57□□□□□ -0.24
HPS4-218ENST00000519774 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 WASF1Q92558 559 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 ALG1Q9BT22 464 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 WDR11Q9BZH6 1224 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 SH3GLB2Q9NR46 395 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 SYNRGQ9UMZ2 1314 aa13.57□□□□□ -0.24
HPS4-218ENST00000519774 DUSP11O75319 330 aaKnown RBP13.56□□□□□ -0.24
HPS4-218ENST00000519774 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
HPS4-218ENST00000519774 FDPSP14324 419 aaKnown RBP13.56□□□□□ -0.24
HPS4-218ENST00000519774 XBP1P17861 261 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 MCM2P49736 904 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 TTLL4Q14679 1199 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 IQSEC1Q6DN90 963 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 VSIG10LQ86VR7 867 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 TMX3Q96JJ7 454 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 RTEL1Q9NZ71 1219 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 KCNJ14Q9UNX9 436 aa13.56□□□□□ -0.24
HPS4-218ENST00000519774 RBM47A0AV96 593 aaKnown RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 KBTBD13C9JR72 458 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 ARIH2O95376 493 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 FOSP01100 380 aaPredicted RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 C6orf222P0C671 652 aaPredicted RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 TXNP10599 105 aaKnown RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 CLK2P49760 499 aaKnown RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 MRPS9P82933 396 aaKnown RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 LRRC41Q15345 812 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 DUSP28Q4G0W2 176 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 TEX2Q8IWB9 1127 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 ANKLE1Q8NAG6 615 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 COPS5Q92905 334 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 LLPHQ9BRT6 129 aaKnown RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 AP5M1Q9H0R1 490 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 SPC25Q9HBM1 224 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 GNEQ9Y223 722 aaKnown RBP13.55□□□□□ -0.24
HPS4-218ENST00000519774 MRVI1Q9Y6F6 885 aa13.55□□□□□ -0.24
HPS4-218ENST00000519774 MYADML2A6NDP7 307 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 DYNC1LI2O43237 492 aaPredicted RBP13.54□□□□□ -0.24
HPS4-218ENST00000519774 ADAMTS4O75173 837 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 RGS20O76081 388 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 CAPN2P17655 700 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
HPS4-218ENST00000519774 BEX3Q00994 111 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 RNF180Q86T96 592 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 BLIDQ8IZY5 108 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 OR6J1Q8NGC5 347 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
HPS4-218ENST00000519774 DNM1LO00429 736 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 NKRFO15226 690 aaKnown RBP eCLIP13.53□□□□□ -0.24
HPS4-218ENST00000519774 SORBS3O60504 671 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 SREBF1P36956 1147 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 GJA9P57773 515 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
HPS4-218ENST00000519774 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 TRIM29Q14134 588 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 LY6KQ17RY6 165 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 GNPTABQ3T906 1256 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 MCTP2Q6DN12 878 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 NECAB2Q7Z6G3 386 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
HPS4-218ENST00000519774 FAM184AQ8NB25 1140 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 DAGLBQ8NCG7 672 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
HPS4-218ENST00000519774 PHF20Q9BVI0 1012 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 UPF3AQ9H1J1 476 aaKnown RBP13.53□□□□□ -0.24
HPS4-218ENST00000519774 C11orf49Q9H6J7 331 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 DOCK5Q9H7D0 1870 aa13.53□□□□□ -0.24
HPS4-218ENST00000519774 STAM2O75886 525 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 GH1P01241 217 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 ZNF76P36508 570 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 NPY5RQ15761 445 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 GNASQ5JWF2 1037 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 GALNT17Q6IS24 598 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 CCDC62Q6P9F0 684 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 NLRX1Q86UT6 975 aa13.52□□□□□ -0.25
HPS4-218ENST00000519774 FERMT2Q96AC1 680 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms