RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 RPL13P26373 211 aaKnown RBP6.51□□□□□ -1.37
LINC01088-211ENST00000515597 STAT5AP42229 794 aa6.51□□□□□ -1.37
LINC01088-211ENST00000515597 RGL3Q3MIN7 710 aa6.51□□□□□ -1.37
LINC01088-211ENST00000515597 MIB1Q86YT6 1006 aa6.51□□□□□ -1.37
LINC01088-211ENST00000515597 NPLOC4Q8TAT6 608 aa6.51□□□□□ -1.37
LINC01088-211ENST00000515597 MRGPRX3Q96LB0 322 aa6.51□□□□□ -1.37
LINC01088-211ENST00000515597 RBM15Q96T37 977 aaKnown RBP eCLIP6.51□□□□□ -1.37
LINC01088-211ENST00000515597 NKX2-4Q9H2Z4 354 aa6.51□□□□□ -1.37
LINC01088-211ENST00000515597 SMPD4Q9NXE4 827 aa6.51□□□□□ -1.37
LINC01088-211ENST00000515597 NAT2P11245 290 aa6.5□□□□□ -1.37
LINC01088-211ENST00000515597 TCF3P15923 654 aa6.5□□□□□ -1.37
LINC01088-211ENST00000515597 ERCC5P28715 1186 aaPredicted RBP6.5□□□□□ -1.37
LINC01088-211ENST00000515597 ADAM17P78536 824 aa6.5□□□□□ -1.37
LINC01088-211ENST00000515597 NLRP10Q86W26 655 aa6.5□□□□□ -1.37
LINC01088-211ENST00000515597 KYQ8NBH2 561 aa6.5□□□□□ -1.37
LINC01088-211ENST00000515597 BTN2A2Q8WVV5 523 aa6.5□□□□□ -1.37
LINC01088-211ENST00000515597 SEC14L1Q92503 715 aa6.5□□□□□ -1.37
LINC01088-211ENST00000515597 CYP26B1Q9NR63 512 aa6.5□□□□□ -1.37
LINC01088-211ENST00000515597 TMEFF2Q9UIK5 374 aaPredicted RBP6.5□□□□□ -1.37
LINC01088-211ENST00000515597 ZNF143P52747 638 aaPredicted RBP6.49□□□□□ -1.37
LINC01088-211ENST00000515597 ITGA1P56199 1179 aa6.49□□□□□ -1.37
LINC01088-211ENST00000515597 RPL11P62913 178 aaKnown RBP6.49□□□□□ -1.37
LINC01088-211ENST00000515597 MCTP2Q6DN12 878 aa6.49□□□□□ -1.37
LINC01088-211ENST00000515597 MILR1Q7Z6M3 343 aa6.49□□□□□ -1.37
LINC01088-211ENST00000515597 CCDC103Q8IW40 242 aa6.49□□□□□ -1.37
LINC01088-211ENST00000515597 FBXL7Q9UJT9 491 aa6.49□□□□□ -1.37
LINC01088-211ENST00000515597 MYRFQ9Y2G1 1151 aa6.49□□□□□ -1.37
LINC01088-211ENST00000515597 B2RBV5 119 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 ARNTLO00327 626 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 BCL6P41182 706 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 SLC6A11P48066 632 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 NCAPHQ15003 741 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 TBC1D10BQ4KMP7 808 aaPredicted RBP6.48□□□□□ -1.37
LINC01088-211ENST00000515597 ZC3H18Q86VM9 953 aaKnown RBP6.48□□□□□ -1.37
LINC01088-211ENST00000515597 FAM126BQ8IXS8 530 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 LOXL4Q96JB6 756 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 INVSQ9Y283 1065 aa6.48□□□□□ -1.37
LINC01088-211ENST00000515597 TIMM13Q9Y5L4 95 aaPredicted RBP6.48□□□□□ -1.37
LINC01088-211ENST00000515597 DDX3XO00571 662 aaKnown RBP eCLIP6.47□□□□□ -1.37
LINC01088-211ENST00000515597 PLATP00750 562 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 ECI1P42126 302 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 RBM10P98175 930 aaKnown RBP6.47□□□□□ -1.37
LINC01088-211ENST00000515597 PRSS53Q2L4Q9 553 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 FAM26FQ5R3K3 315 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 C6orf15Q6UXA7 325 aaPredicted RBP6.47□□□□□ -1.37
LINC01088-211ENST00000515597 CEP68Q76N32 757 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 TXNDC5Q8NBS9 432 aaKnown RBP6.47□□□□□ -1.37
LINC01088-211ENST00000515597 DIO2Q92813 273 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 ZNF428Q96B54 188 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 TRMT2BQ96GJ1 504 aaKnown RBP6.47□□□□□ -1.37
LINC01088-211ENST00000515597 C8orf49Q96NF6 230 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 CAPN10Q9HC96 672 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 PCDH18Q9HCL0 1135 aa6.47□□□□□ -1.37
LINC01088-211ENST00000515597 MROH6A6NGR9 719 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 SMAD7O15105 426 aaKnown RBP6.46□□□□□ -1.38
LINC01088-211ENST00000515597 ITGAVP06756 1048 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 SNRPB2P08579 225 aaKnown RBP6.46□□□□□ -1.38
LINC01088-211ENST00000515597 SF1Q15637 639 aaKnown RBP6.46□□□□□ -1.38
LINC01088-211ENST00000515597 CR1LQ2VPA4 569 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 PRR31Q5SQ13 230 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 MROH9Q5TGP6 573 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.38
LINC01088-211ENST00000515597 ZNF227Q86WZ6 799 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 VPS37DQ86XT2 251 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 RIOX2Q8IUF8 465 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 LGI4Q8N135 537 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 Q8N1Y9 231 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 TTLL6Q8N841 843 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 ZSWIM3Q96MP5 696 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 YIPF4Q9BSR8 244 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 MRVI1Q9Y6F6 885 aa6.46□□□□□ -1.38
LINC01088-211ENST00000515597 MEFVO15553 781 aaPredicted RBP6.45□□□□□ -1.38
LINC01088-211ENST00000515597 ZNF20P17024 532 aa6.45□□□□□ -1.38
LINC01088-211ENST00000515597 ADAM9Q13443 819 aa6.45□□□□□ -1.38
LINC01088-211ENST00000515597 SV2CQ496J9 727 aa6.45□□□□□ -1.38
LINC01088-211ENST00000515597 E4F1Q66K89 784 aaPredicted RBP6.45□□□□□ -1.38
LINC01088-211ENST00000515597 KREMEN2Q8NCW0 462 aa6.45□□□□□ -1.38
LINC01088-211ENST00000515597 X6R8D5 127 aa6.45□□□□□ -1.38
LINC01088-211ENST00000515597 MATN3O15232 486 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 TNFRSF1AP19438 455 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 KIAA2012Q0VF49 1180 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 KCNAB2Q13303 367 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 GNL2Q13823 731 aaKnown RBP6.44□□□□□ -1.38
LINC01088-211ENST00000515597 IQCEQ6IPM2 695 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 BORAQ6PGQ7 559 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 FAM124AQ86V42 546 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 RCBTB1Q8NDN9 531 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 TMEM169Q96HH4 297 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 TINF2Q9BSI4 451 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 LRP2BPQ9P2M1 347 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 ZNF536O15090 1300 aa6.44□□□□□ -1.38
LINC01088-211ENST00000515597 MYO1BO43795 1136 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 SUSD5O60279 629 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 SSBP05455 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
LINC01088-211ENST00000515597 LCP1P13796 627 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 KCNJ6P48051 423 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 NKX3-2P78367 333 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 TNNI3KQ59H18 835 aa6.43□□□□□ -1.38
LINC01088-211ENST00000515597 PRAMEF18Q5VWM3 479 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms