RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PIK3AP1Q6ZUJ8 805 aa11.57□□□□□ -0.56
NEDD9-214ENST00000513989 MSL3Q8N5Y2 521 aaKnown RBP11.57□□□□□ -0.56
NEDD9-214ENST00000513989 TRIB2Q92519 343 aa11.57□□□□□ -0.56
NEDD9-214ENST00000513989 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEDD9-214ENST00000513989 MTMR6Q9Y217 621 aa11.57□□□□□ -0.56
NEDD9-214ENST00000513989 CUL9Q8IWT3 2517 aa11.57□□□□□ -0.56
NEDD9-214ENST00000513989 ZNF236Q9UL36 1845 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 DNAJC25-GNG10A0A024R161 153 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 STAM2O75886 525 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 HMGCRP04035 888 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 PGK2P07205 417 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 XRCC5P13010 732 aaKnown RBP11.56□□□□□ -0.56
NEDD9-214ENST00000513989 PDE4DQ08499 809 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 MAP2K5Q13163 448 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 NR5A1Q13285 461 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 ZNF792Q3KQV3 632 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 MAP3K21Q5TCX8 1036 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-214ENST00000513989 FAM133AQ8N9E0 248 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 USP6NLQ92738 828 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 TAAR1Q96RJ0 339 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 HTATIP2Q9BUP3 242 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 ANO3Q9BYT9 981 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
NEDD9-214ENST00000513989 PLXNA1Q9UIW2 1896 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 M0R2N6 131 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 COBLO75128 1261 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 EIF3JO75822 258 aaKnown RBP11.55□□□□□ -0.56
NEDD9-214ENST00000513989 BRD1O95696 1058 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 NR3C2P08235 984 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 HOXC6P09630 235 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 CYP2B6P20813 491 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 CCND2P30279 289 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 NPY5RQ15761 445 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 STXBP2Q15833 593 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 RILPL1Q5EBL4 403 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 ATL3Q6DD88 541 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 SLC30A10Q6XR72 485 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 NEK8Q86SG6 692 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 FERMT3Q86UX7 667 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 RASGRP4Q8TDF6 673 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 TBCKQ8TEA7 893 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 PAWRQ96IZ0 340 aaKnown RBP11.55□□□□□ -0.56
NEDD9-214ENST00000513989 ZNF396Q96N95 335 aaPredicted RBP11.55□□□□□ -0.56
NEDD9-214ENST00000513989 TMEM260Q9NX78 707 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 CEP131Q9UPN4 1083 aa11.55□□□□□ -0.56
NEDD9-214ENST00000513989 MAFGO15525 162 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 MARCH6O60337 910 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 F13A1P00488 732 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 TFRCP02786 760 aaKnown RBP11.54□□□□□ -0.56
NEDD9-214ENST00000513989 CYP3A4P08684 503 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 MYCLP12524 364 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-214ENST00000513989 GCFC2P16383 781 aaKnown RBP11.54□□□□□ -0.56
NEDD9-214ENST00000513989 EIF2AK2P19525 551 aaKnown RBP11.54□□□□□ -0.56
NEDD9-214ENST00000513989 ATP2B1P20020 1258 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 SREBF1P36956 1147 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 ARHGAP4P98171 946 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 CNTN2Q02246 1040 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 INF2Q27J81 1249 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 GNPTABQ3T906 1256 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 FOXD4L5Q5VV16 416 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-214ENST00000513989 MFSD14CQ5VZR4 134 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 PCNX4Q63HM2 1172 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 NLRX1Q86UT6 975 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 VSIG10LQ86VR7 867 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 FOXD4L4Q8WXT5 416 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-214ENST00000513989 CDHR1Q96JP9 859 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 APBA2Q99767 749 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 CFAP45Q9UL16 551 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 RPTORQ8N122 1335 aa11.54□□□□□ -0.56
NEDD9-214ENST00000513989 LTBP2Q14767 1821 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 SOWAHBA6NEL2 793 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 SOX1O00570 391 aaPredicted RBP11.53□□□□□ -0.56
NEDD9-214ENST00000513989 CCNT1O60563 726 aaKnown RBP11.53□□□□□ -0.56
NEDD9-214ENST00000513989 BAG4O95429 457 aaKnown RBP11.53□□□□□ -0.56
NEDD9-214ENST00000513989 BMP15O95972 392 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 DDIT3P35638 169 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 ALDH5A1P51649 535 aaPredicted RBP11.53□□□□□ -0.56
NEDD9-214ENST00000513989 ORC2Q13416 577 aaPredicted RBP11.53□□□□□ -0.56
NEDD9-214ENST00000513989 PGM5Q15124 567 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 CCL14Q16627 93 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 LETM2Q2VYF4 491 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 OLFML2BQ68BL8 750 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 PPP4R3AQ6IN85 833 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 KCNV1Q6PIU1 500 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 MOXD1Q6UVY6 613 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 TNFRSF25Q93038 417 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 PGBD1Q96JS3 809 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 PDCD2LQ9BRP1 358 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 TINF2Q9BSI4 451 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 COL20A1Q9P218 1284 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 OGDHLQ9ULD0 1010 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 CNPY2Q9Y2B0 182 aa11.53□□□□□ -0.56
NEDD9-214ENST00000513989 UNC80Q8N2C7 3258 aa11.52□□□□□ -0.56
NEDD9-214ENST00000513989 CYP3A7-CYP3A51PA0A087WV96 503 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 KIF28PB7ZC32 967 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 EVI5O60447 810 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms