RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 SMARCA1P28370 1054 aa30.9■■■□□ 2.54
SNF8-208ENST00000510195 BAZ2BQ9UIF8 2168 aaKnown RBP30.89■■■□□ 2.54
SNF8-208ENST00000510195 GCOM1H8Y6P7 765 aaPredicted RBP30.89■■■□□ 2.54
SNF8-208ENST00000510195 POLR2MP0CAP2 368 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 CYP2C9P11712 490 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 LAMC2Q13753 1193 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 DGKDQ16760 1214 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 CASC1Q6TDU7 716 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 VSIG10LQ86VR7 867 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 SESTD1Q86VW0 696 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 PBX4Q9BYU1 374 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 LSG1Q9H089 658 aaKnown RBP30.89■■■□□ 2.54
SNF8-208ENST00000510195 ZNF576Q9H609 170 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 MRVI1Q9Y6F6 885 aa30.89■■■□□ 2.54
SNF8-208ENST00000510195 DDAH1O94760 285 aa30.88■■■□□ 2.53
SNF8-208ENST00000510195 KIF5BP33176 963 aa30.88■■■□□ 2.53
SNF8-208ENST00000510195 RFC2P35250 354 aa30.88■■■□□ 2.53
SNF8-208ENST00000510195 MYLIPQ8WY64 445 aa30.88■■■□□ 2.53
SNF8-208ENST00000510195 LY9Q9HBG7 655 aa30.88■■■□□ 2.53
SNF8-208ENST00000510195 TGFB3P10600 412 aa30.87■■■□□ 2.53
SNF8-208ENST00000510195 MCM5P33992 734 aa30.87■■■□□ 2.53
SNF8-208ENST00000510195 PGM5Q15124 567 aa30.87■■■□□ 2.53
SNF8-208ENST00000510195 RAB30Q15771 203 aa30.87■■■□□ 2.53
SNF8-208ENST00000510195 PPTC7Q8NI37 304 aa30.87■■■□□ 2.53
SNF8-208ENST00000510195 TMEM87BQ96K49 555 aa30.87■■■□□ 2.53
SNF8-208ENST00000510195 LZTS2Q9BRK4 669 aa30.87■■■□□ 2.53
SNF8-208ENST00000510195 ESYT1Q9BSJ8 1104 aa30.87■■■□□ 2.53
SNF8-208ENST00000510195 DLL1O00548 723 aa30.86■■■□□ 2.53
SNF8-208ENST00000510195 HOXA13P31271 388 aaPredicted RBP30.86■■■□□ 2.53
SNF8-208ENST00000510195 BFSP2Q13515 415 aa30.86■■■□□ 2.53
SNF8-208ENST00000510195 OTOP2Q7RTS6 562 aa30.86■■■□□ 2.53
SNF8-208ENST00000510195 RETREG2Q8NC44 543 aa30.86■■■□□ 2.53
SNF8-208ENST00000510195 CTCFLQ8NI51 663 aaPredicted RBP30.86■■■□□ 2.53
SNF8-208ENST00000510195 SCLYQ96I15 445 aa30.86■■■□□ 2.53
SNF8-208ENST00000510195 SPZ1Q9BXG8 430 aa30.86■■■□□ 2.53
SNF8-208ENST00000510195 CXXC1Q9P0U4 656 aaPredicted RBP30.86■■■□□ 2.53
SNF8-208ENST00000510195 MSRAQ9UJ68 235 aa30.86■■■□□ 2.53
SNF8-208ENST00000510195 MYCLP12524 364 aaPredicted RBP30.85■■■□□ 2.53
SNF8-208ENST00000510195 FOSL2P15408 326 aa30.85■■■□□ 2.53
SNF8-208ENST00000510195 DHX37Q8IY37 1157 aaKnown RBP30.85■■■□□ 2.53
SNF8-208ENST00000510195 ZNF654Q8IZM8 581 aa30.85■■■□□ 2.53
SNF8-208ENST00000510195 MAFAQ8NHW3 353 aaPredicted RBP30.85■■■□□ 2.53
SNF8-208ENST00000510195 KATNAL1Q9BW62 490 aa30.85■■■□□ 2.53
SNF8-208ENST00000510195 NOD1Q9Y239 953 aa30.85■■■□□ 2.53
SNF8-208ENST00000510195 PRUNE2Q8WUY3 3088 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 PRC1O43663 620 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 RGS20O76081 388 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 CCND2P30279 289 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 GNAQP50148 359 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 GRIN2CQ14957 1233 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 BMP2KLQ5H9B9 411 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 CENPQQ7L2Z9 268 aaPredicted RBP30.84■■■□□ 2.53
SNF8-208ENST00000510195 CCDC155Q8N6L0 562 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 KAT2BQ92831 832 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 VWCEQ96DN2 955 aa30.84■■■□□ 2.53
SNF8-208ENST00000510195 GRXCR1A8MXD5 290 aa30.83■■■□□ 2.53
SNF8-208ENST00000510195 PPFIA4O75335 1185 aa30.83■■■□□ 2.53
SNF8-208ENST00000510195 STAM2O75886 525 aa30.83■■■□□ 2.53
SNF8-208ENST00000510195 LIFRP42702 1097 aa30.83■■■□□ 2.53
SNF8-208ENST00000510195 NECTIN1Q15223 517 aa30.83■■■□□ 2.53
SNF8-208ENST00000510195 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.83■■■□□ 2.53
SNF8-208ENST00000510195 CAGE1Q8TC20 777 aa30.83■■■□□ 2.53
SNF8-208ENST00000510195 RRP36Q96EU6 259 aaKnown RBP30.83■■■□□ 2.53
SNF8-208ENST00000510195 SLC4A7Q9Y6M7 1214 aa30.83■■■□□ 2.53
SNF8-208ENST00000510195 CUL9Q8IWT3 2517 aa30.82■■■□□ 2.52
SNF8-208ENST00000510195 CHD9Q3L8U1 2897 aa30.82■■■□□ 2.52
SNF8-208ENST00000510195 SLC27A2O14975 620 aa30.82■■■□□ 2.52
SNF8-208ENST00000510195 HOXD8P13378 290 aaPredicted RBP30.82■■■□□ 2.52
SNF8-208ENST00000510195 PBX2P40425 430 aa30.82■■■□□ 2.52
SNF8-208ENST00000510195 PTGISQ16647 500 aa30.82■■■□□ 2.52
SNF8-208ENST00000510195 MYSM1Q5VVJ2 828 aa30.82■■■□□ 2.52
SNF8-208ENST00000510195 CCDC69A6NI79 296 aa30.81■■■□□ 2.52
SNF8-208ENST00000510195 SH2B2O14492 632 aaPredicted RBP30.81■■■□□ 2.52
SNF8-208ENST00000510195 IQCF3P0C7M6 154 aa30.81■■■□□ 2.52
SNF8-208ENST00000510195 CALM1P0DP23 149 aa30.81■■■□□ 2.52
SNF8-208ENST00000510195 CALM2P0DP24 149 aa30.81■■■□□ 2.52
SNF8-208ENST00000510195 CALM3P0DP25 149 aa30.81■■■□□ 2.52
SNF8-208ENST00000510195 ACTN1P12814 892 aa30.81■■■□□ 2.52
SNF8-208ENST00000510195 CELF3Q5SZQ8 465 aaKnown RBP30.81■■■□□ 2.52
SNF8-208ENST00000510195 CREB3L3Q68CJ9 461 aa30.81■■■□□ 2.52
SNF8-208ENST00000510195 FCHSD1Q86WN1 690 aa30.81■■■□□ 2.52
SNF8-208ENST00000510195 FRMPD4Q14CM0 1322 aa30.8■■■□□ 2.52
SNF8-208ENST00000510195 NFXL1Q6ZNB6 911 aa30.8■■■□□ 2.52
SNF8-208ENST00000510195 SEC63Q9UGP8 760 aaKnown RBP30.8■■■□□ 2.52
SNF8-208ENST00000510195 GTF2IRD1Q9UHL9 959 aa30.8■■■□□ 2.52
SNF8-208ENST00000510195 MYH7BA7E2Y1 1941 aa30.8■■■□□ 2.52
SNF8-208ENST00000510195 F2P00734 622 aa30.79■■■□□ 2.52
SNF8-208ENST00000510195 CHMP4BP1P59074 171 aa30.79■■■□□ 2.52
SNF8-208ENST00000510195 GNPTABQ3T906 1256 aa30.79■■■□□ 2.52
SNF8-208ENST00000510195 C7orf31Q8N865 590 aa30.79■■■□□ 2.52
SNF8-208ENST00000510195 IL31RAQ8NI17 732 aa30.79■■■□□ 2.52
SNF8-208ENST00000510195 AFAP1L1Q8TED9 768 aa30.79■■■□□ 2.52
SNF8-208ENST00000510195 ANO2Q9NQ90 1003 aa30.79■■■□□ 2.52
SNF8-208ENST00000510195 HAS3O00219 553 aa30.78■■■□□ 2.52
SNF8-208ENST00000510195 PARNO95453 639 aaKnown RBP30.78■■■□□ 2.52
SNF8-208ENST00000510195 PSEN2P49810 448 aa30.78■■■□□ 2.52
SNF8-208ENST00000510195 RBL2Q08999 1139 aa30.78■■■□□ 2.52
SNF8-208ENST00000510195 RNF20Q5VTR2 975 aa30.78■■■□□ 2.52
SNF8-208ENST00000510195 GDF6Q6KF10 455 aaPredicted RBP30.78■■■□□ 2.52
SNF8-208ENST00000510195 DEFB128Q7Z7B8 93 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms