RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 SKIV2LQ15477 1246 aaKnown RBP17.3■□□□□ 0.36
SMAD5-206ENST00000509962 DGKDQ16760 1214 aa17.3■□□□□ 0.36
SMAD5-206ENST00000509962 ADAMTS19Q8TE59 1207 aa17.3■□□□□ 0.36
SMAD5-206ENST00000509962 COL20A1Q9P218 1284 aa17.3■□□□□ 0.36
SMAD5-206ENST00000509962 DDX41Q9UJV9 622 aaKnown RBP17.3■□□□□ 0.36
SMAD5-206ENST00000509962 TTC28Q96AY4 2481 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 VCANP13611 3396 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 RFXAPO00287 272 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 BAIAP3O94812 1187 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 NR3C2P08235 984 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 EIF2AK2P19525 551 aaKnown RBP17.29■□□□□ 0.36
SMAD5-206ENST00000509962 KCNJ6P48051 423 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 LAMC2Q13753 1193 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 AAK1Q2M2I8 961 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 IFIT1BQ5T764 474 aaKnown RBP17.29■□□□□ 0.36
SMAD5-206ENST00000509962 GDF6Q6KF10 455 aaPredicted RBP17.29■□□□□ 0.36
SMAD5-206ENST00000509962 SESTD1Q86VW0 696 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 HERC6Q8IVU3 1022 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 C7orf31Q8N865 590 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 AFAP1L1Q8TED9 768 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 UHRF1Q96T88 793 aaPredicted RBP17.29■□□□□ 0.36
SMAD5-206ENST00000509962 AMNQ9BXJ7 453 aa17.29■□□□□ 0.36
SMAD5-206ENST00000509962 TRIP12Q14669 1992 aaPredicted RBP17.29■□□□□ 0.36
SMAD5-206ENST00000509962 MYH6P13533 1939 aa17.28■□□□□ 0.36
SMAD5-206ENST00000509962 PARNO95453 639 aaKnown RBP17.28■□□□□ 0.36
SMAD5-206ENST00000509962 SELPP16109 830 aa17.28■□□□□ 0.36
SMAD5-206ENST00000509962 POU3F3P20264 500 aaPredicted RBP17.28■□□□□ 0.36
SMAD5-206ENST00000509962 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
SMAD5-206ENST00000509962 ARNTL2Q8WYA1 636 aa17.28■□□□□ 0.36
SMAD5-206ENST00000509962 KAT2BQ92831 832 aa17.28■□□□□ 0.36
SMAD5-206ENST00000509962 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
SMAD5-206ENST00000509962 PXMP2Q9NR77 195 aa17.28■□□□□ 0.36
SMAD5-206ENST00000509962 MAP3K20Q9NYL2 800 aaKnown RBP17.28■□□□□ 0.36
SMAD5-206ENST00000509962 MRVI1Q9Y6F6 885 aa17.28■□□□□ 0.36
SMAD5-206ENST00000509962 KIAA1217Q5T5P2 1943 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 TLL1O43897 1013 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 MYCLP12524 364 aaPredicted RBP17.27■□□□□ 0.36
SMAD5-206ENST00000509962 TAP1Q03518 808 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 ZBED2Q9BTP6 218 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 KATNAL1Q9BW62 490 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 HDAC6Q9UBN7 1215 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 MTCH2Q9Y6C9 303 aa17.27■□□□□ 0.36
SMAD5-206ENST00000509962 PSEN2P49810 448 aa17.26■□□□□ 0.35
SMAD5-206ENST00000509962 TRDNQ13061 729 aa17.26■□□□□ 0.35
SMAD5-206ENST00000509962 KCNV1Q6PIU1 500 aa17.26■□□□□ 0.35
SMAD5-206ENST00000509962 LRRC8DQ7L1W4 858 aa17.26■□□□□ 0.35
SMAD5-206ENST00000509962 SAMD3Q8N6K7 520 aa17.26■□□□□ 0.35
SMAD5-206ENST00000509962 EMID1Q96A84 441 aaPredicted RBP17.26■□□□□ 0.35
SMAD5-206ENST00000509962 GTF2IRD1Q9UHL9 959 aa17.26■□□□□ 0.35
SMAD5-206ENST00000509962 MYH7BA7E2Y1 1941 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 ZBTB5O15062 677 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 PPFIA4O75335 1185 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 CKBP12277 381 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 HSD17B4P51659 736 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 TFF2Q03403 129 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 TRAF1Q13077 416 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 MFSD10Q14728 455 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 KIAA0753Q2KHM9 967 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 CNKSR3Q6P9H4 555 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 PPTC7Q8NI37 304 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 LAMA4Q16363 1823 aa17.25■□□□□ 0.35
SMAD5-206ENST00000509962 TET1Q8NFU7 2136 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 BMP1P13497 986 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 COL9A1P20849 921 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 WDR5P61964 334 aaKnown RBP17.24■□□□□ 0.35
SMAD5-206ENST00000509962 PTK7Q13308 1070 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 GPNMBQ14956 572 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 STOX1Q6ZVD7 989 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 VSIG10LQ86VR7 867 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 DHX38Q92620 1227 aaKnown RBP17.24■□□□□ 0.35
SMAD5-206ENST00000509962 PDCD2LQ9BRP1 358 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 MAD2L2Q9UI95 211 aa17.24■□□□□ 0.35
SMAD5-206ENST00000509962 SPTBN5Q9NRC6 3674 aaKnown RBP17.24■□□□□ 0.35
SMAD5-206ENST00000509962 TANC1Q9C0D5 1861 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 ABHD14A-ACY1A0A1B0GW23 586 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 PALM3A6NDB9 673 aaPredicted RBP17.23■□□□□ 0.35
SMAD5-206ENST00000509962 EPOPA6NHQ4 379 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 OPLAHO14841 1288 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 ZNF286BP0CG31 522 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 HOXA13P31271 388 aaPredicted RBP17.23■□□□□ 0.35
SMAD5-206ENST00000509962 RBL2Q08999 1139 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 IKBKEQ14164 716 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 SEC23AQ15436 765 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 CELF3Q5SZQ8 465 aaKnown RBP17.23■□□□□ 0.35
SMAD5-206ENST00000509962 MYSM1Q5VVJ2 828 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 CYB5R4Q7L1T6 521 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 MTMR8Q96EF0 704 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
SMAD5-206ENST00000509962 SPATA33Q96N06 139 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 COG5Q9UP83 839 aa17.23■□□□□ 0.35
SMAD5-206ENST00000509962 TCF20Q9UGU0 1960 aaKnown RBP17.22■□□□□ 0.35
SMAD5-206ENST00000509962 ERICH2A1L162 156 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 GCOM1H8Y6P7 765 aaPredicted RBP17.22■□□□□ 0.35
SMAD5-206ENST00000509962 HAS3O00219 553 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 SORBS3O60504 671 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms