RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PTGISQ16647 500 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 TRIM71Q2Q1W2 868 aaKnown RBP18.63■□□□□ 0.57
RAB40C-202ENST00000509637 CYB5R4Q7L1T6 521 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 SESTD1Q86VW0 696 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 CHD1LQ86WJ1 897 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 HERC6Q8IVU3 1022 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 OSBPL7Q9BZF2 842 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 HDAC6Q9UBN7 1215 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-202ENST00000509637 EIF2AK2P19525 551 aaKnown RBP18.62■□□□□ 0.57
RAB40C-202ENST00000509637 COL9A1P20849 921 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 MBTPS1Q14703 1052 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 SEC23AQ15436 765 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 IL31RAQ8NI17 732 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 GPKOWQ92917 476 aaPredicted RBP eCLIP18.62■□□□□ 0.57
RAB40C-202ENST00000509637 MTMR8Q96EF0 704 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 UHRF1Q96T88 793 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-202ENST00000509637 RMDN3Q96TC7 470 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 RNF41Q9H4P4 317 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-202ENST00000509637 SENP2Q9HC62 589 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 PNMA2Q9UL42 364 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 TAF6LQ9Y6J9 622 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 ABCB11O95342 1321 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 MYH6P13533 1939 aa18.62■□□□□ 0.57
RAB40C-202ENST00000509637 BAZ2BQ9UIF8 2168 aaKnown RBP18.61■□□□□ 0.57
RAB40C-202ENST00000509637 HAS3O00219 553 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 SORBS3O60504 671 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 GH1P01241 217 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 RFC2P35250 354 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 SP2Q02086 613 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 RETREG2Q8NC44 543 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 EXOC6Q8TAG9 804 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 PHOSPHO2Q8TCD6 241 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 NSUN6Q8TEA1 469 aaKnown RBP18.61■□□□□ 0.57
RAB40C-202ENST00000509637 ARNTL2Q8WYA1 636 aa18.61■□□□□ 0.57
RAB40C-202ENST00000509637 FTOQ9C0B1 505 aaKnown RBP eCLIP18.61■□□□□ 0.57
RAB40C-202ENST00000509637 TRANK1O15050 2925 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 NR3C2P08235 984 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 HSD17B4P51659 736 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 WDR5P61964 334 aaKnown RBP18.6■□□□□ 0.57
RAB40C-202ENST00000509637 GHRHRQ02643 423 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 RBL2Q08999 1139 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 GRB10Q13322 594 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 FBXO11Q86XK2 927 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 SLC9A7Q96T83 725 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 DSCC1Q9BVC3 393 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 KAT14Q9H8E8 782 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 PXMP2Q9NR77 195 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 GTF2IRD1Q9UHL9 959 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 TELO2Q9Y4R8 837 aa18.6■□□□□ 0.57
RAB40C-202ENST00000509637 CXCL10P02778 98 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 ZNF286BP0CG31 522 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 CKBP12277 381 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 PDE4AP27815 886 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 PSEN2P49810 448 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 BFSP2Q13515 415 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 STXBP2Q15833 593 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 ASPRV1Q53RT3 343 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 IWS1Q96ST2 819 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 ALG1Q9BT22 464 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 MAD2L2Q9UI95 211 aa18.59■□□□□ 0.57
RAB40C-202ENST00000509637 RAD50Q92878 1312 aa18.58■□□□□ 0.57
RAB40C-202ENST00000509637 CFBP00751 764 aa18.58■□□□□ 0.56
RAB40C-202ENST00000509637 PARP1P09874 1014 aaKnown RBP18.58■□□□□ 0.56
RAB40C-202ENST00000509637 ACTN1P12814 892 aa18.58■□□□□ 0.56
RAB40C-202ENST00000509637 HOXD8P13378 290 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-202ENST00000509637 HOXA13P31271 388 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-202ENST00000509637 MKRN4PQ13434 485 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-202ENST00000509637 BRDTQ58F21 947 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-202ENST00000509637 LRRC8DQ7L1W4 858 aa18.58■□□□□ 0.56
RAB40C-202ENST00000509637 IQCA1Q86XH1 822 aa18.58■□□□□ 0.56
RAB40C-202ENST00000509637 KHSRPQ92945 711 aaKnown RBP eCLIP18.58■□□□□ 0.56
RAB40C-202ENST00000509637 EMID1Q96A84 441 aaPredicted RBP18.58■□□□□ 0.56
RAB40C-202ENST00000509637 PDCD2LQ9BRP1 358 aa18.58■□□□□ 0.56
RAB40C-202ENST00000509637 MRPL11Q9Y3B7 192 aaKnown RBP18.58■□□□□ 0.56
RAB40C-202ENST00000509637 XIRP2A4UGR9 3374 aa18.58■□□□□ 0.56
RAB40C-202ENST00000509637 BRWD1Q9NSI6 2320 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 PALM3A6NDB9 673 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-202ENST00000509637 CYTH3O43739 400 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 TLL1O43897 1013 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 SELPP16109 830 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 CASTP20810 708 aaKnown RBP18.57■□□□□ 0.56
RAB40C-202ENST00000509637 HSDL1Q3SXM5 330 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 ZNF618Q5T7W0 954 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 ARHGEF16Q5VV41 709 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 MYSM1Q5VVJ2 828 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 CAGE1Q8TC20 777 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 AFAP1L1Q8TED9 768 aa18.57■□□□□ 0.56
RAB40C-202ENST00000509637 COL4A4P53420 1690 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-202ENST00000509637 KLRF2D3W0D1 207 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 EIF3JO75822 258 aaKnown RBP18.56■□□□□ 0.56
RAB40C-202ENST00000509637 F2P00734 622 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 GSPT1P15170 499 aaKnown RBP18.56■□□□□ 0.56
RAB40C-202ENST00000509637 PTH1RQ03431 593 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 COL9A3Q14050 684 aaPredicted RBP18.56■□□□□ 0.56
RAB40C-202ENST00000509637 MFSD10Q14728 455 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 KIAA0753Q2KHM9 967 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.56■□□□□ 0.56
RAB40C-202ENST00000509637 STOX1Q6ZVD7 989 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 MCF2L2Q86YR7 1114 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms