RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 CAGE1Q8TC20 777 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 PHOSPHO2Q8TCD6 241 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 SYMPKQ92797 1274 aaKnown RBP17.92■□□□□ 0.46
SMAD5-205ENST00000509297 PRDM12Q9H4Q4 367 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 RIOX1Q9H6W3 641 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 PPP1R11O60927 126 aaPredicted RBP17.91■□□□□ 0.46
SMAD5-205ENST00000509297 CFBP00751 764 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 HOXD8P13378 290 aaPredicted RBP17.91■□□□□ 0.46
SMAD5-205ENST00000509297 EIF2AK2P19525 551 aaKnown RBP17.91■□□□□ 0.46
SMAD5-205ENST00000509297 RBL2Q08999 1139 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 GRM4Q14833 912 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 DGKDQ16760 1214 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 KCNV1Q6PIU1 500 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 CCDC155Q8N6L0 562 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 PPTC7Q8NI37 304 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 AFAP1L1Q8TED9 768 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 KAT2BQ92831 832 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 NKX2-4Q9H2Z4 354 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 NOD1Q9Y239 953 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
SMAD5-205ENST00000509297 PCDHA1Q9Y5I3 950 aa17.91■□□□□ 0.46
SMAD5-205ENST00000509297 KIAA1217Q5T5P2 1943 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 ZBBXA8MT70 800 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 PARNO95453 639 aaKnown RBP17.9■□□□□ 0.46
SMAD5-205ENST00000509297 TROAPQ12815 778 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 ADGRE1Q14246 886 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 PTGISQ16647 500 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 VSIG10LQ86VR7 867 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 CTAGE1Q96RT6 745 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 SLC9A7Q96T83 725 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 PDCD2LQ9BRP1 358 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 MRVI1Q9Y6F6 885 aa17.9■□□□□ 0.46
SMAD5-205ENST00000509297 ERICH2A1L162 156 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 IFIT3O14879 490 aaKnown RBP17.89■□□□□ 0.45
SMAD5-205ENST00000509297 SGSM2O43147 1006 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 BAIAP3O94812 1187 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 F2P00734 622 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 TGFB3P10600 412 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 PTH1RQ03431 593 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 SART3Q15020 963 aaKnown RBP17.89■□□□□ 0.45
SMAD5-205ENST00000509297 SLC35G1Q2M3R5 365 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 DEFB128Q7Z7B8 93 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
SMAD5-205ENST00000509297 NCOA7Q8NI08 942 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 KATNAL1Q9BW62 490 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 MYH6P13533 1939 aa17.89■□□□□ 0.45
SMAD5-205ENST00000509297 TANC1Q9C0D5 1861 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 E7EWF7 191 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 HAS3O00219 553 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 RGS20O76081 388 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 RABGGTBP53611 331 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 TMEM67Q5HYA8 995 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 TJAP1Q5JTD0 557 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 PPP2R2DQ66LE6 453 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 GDF6Q6KF10 455 aaPredicted RBP17.88■□□□□ 0.45
SMAD5-205ENST00000509297 CHST3Q7LGC8 479 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 ATXN2LQ8WWM7 1075 aaKnown RBP17.88■□□□□ 0.45
SMAD5-205ENST00000509297 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 GTF2IRD1Q9UHL9 959 aa17.88■□□□□ 0.45
SMAD5-205ENST00000509297 PNMA6FA0A0J9YX94 578 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 GCOM1H8Y6P7 765 aaPredicted RBP17.87■□□□□ 0.45
SMAD5-205ENST00000509297 CYTH3O43739 400 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 POLR2MP0CAP2 368 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 SELPP16109 830 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 WTAPQ15007 396 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 PGM5Q15124 567 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 MYSM1Q5VVJ2 828 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 DHX37Q8IY37 1157 aaKnown RBP17.87■□□□□ 0.45
SMAD5-205ENST00000509297 PPP1R13LQ8WUF5 828 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 MAP4K1Q92918 833 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 PIGSQ96S52 555 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 MTA3Q9BTC8 594 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 MUC3AQ02505 3323 aa17.87■□□□□ 0.45
SMAD5-205ENST00000509297 GBF1Q92538 1859 aa17.86■□□□□ 0.45
SMAD5-205ENST00000509297 POU3F3P20264 500 aaPredicted RBP17.86■□□□□ 0.45
SMAD5-205ENST00000509297 PSEN2P49810 448 aa17.86■□□□□ 0.45
SMAD5-205ENST00000509297 CELF3Q5SZQ8 465 aaKnown RBP17.86■□□□□ 0.45
SMAD5-205ENST00000509297 CATIPQ7Z7H3 387 aa17.86■□□□□ 0.45
SMAD5-205ENST00000509297 C7orf31Q8N865 590 aa17.86■□□□□ 0.45
SMAD5-205ENST00000509297 FTOQ9C0B1 505 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMAD5-205ENST00000509297 TAF6LQ9Y6J9 622 aa17.86■□□□□ 0.45
SMAD5-205ENST00000509297 STAM2O75886 525 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 CXCL10P02778 98 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 MYCLP12524 364 aaPredicted RBP17.85■□□□□ 0.45
SMAD5-205ENST00000509297 MYOGP15173 224 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 SMARCA1P28370 1054 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 CCND2P30279 289 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 HOXA13P31271 388 aaPredicted RBP17.85■□□□□ 0.45
SMAD5-205ENST00000509297 CHMP4BP1P59074 171 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 PTK7Q13308 1070 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 SCN5AQ14524 2016 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 MFSD10Q14728 455 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 GPNMBQ14956 572 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 FRMPD4Q14CM0 1322 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 LRRC8DQ7L1W4 858 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 HOMER1Q86YM7 354 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 HERC6Q8IVU3 1022 aa17.85■□□□□ 0.45
SMAD5-205ENST00000509297 MB21D2Q8IYB1 491 aaPredicted RBP17.85■□□□□ 0.45
SMAD5-205ENST00000509297 IGDCC4Q8TDY8 1250 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms