RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 FOSL2P15408 326 aa14.51□□□□□ -0.09
PDPN-208ENST00000509009 CASTP20810 708 aaKnown RBP14.51□□□□□ -0.09
PDPN-208ENST00000509009 HOXA13P31271 388 aaPredicted RBP14.51□□□□□ -0.09
PDPN-208ENST00000509009 SART3Q15020 963 aaKnown RBP14.51□□□□□ -0.09
PDPN-208ENST00000509009 HOMER1Q86YM7 354 aa14.51□□□□□ -0.09
PDPN-208ENST00000509009 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDPN-208ENST00000509009 MB21D2Q8IYB1 491 aaPredicted RBP14.51□□□□□ -0.09
PDPN-208ENST00000509009 KAT2BQ92831 832 aa14.51□□□□□ -0.09
PDPN-208ENST00000509009 MTIF3Q9H2K0 278 aaKnown RBP14.51□□□□□ -0.09
PDPN-208ENST00000509009 MYO9BQ13459 2157 aa14.51□□□□□ -0.09
PDPN-208ENST00000509009 BAZ2BQ9UIF8 2168 aaKnown RBP14.51□□□□□ -0.09
PDPN-208ENST00000509009 PRUNE2Q8WUY3 3088 aa14.51□□□□□ -0.09
PDPN-208ENST00000509009 GCOM1H8Y6P7 765 aaPredicted RBP14.5□□□□□ -0.09
PDPN-208ENST00000509009 POLR2MP0CAP2 368 aa14.5□□□□□ -0.09
PDPN-208ENST00000509009 MYCLP12524 364 aaPredicted RBP14.5□□□□□ -0.09
PDPN-208ENST00000509009 CHMP4BP1P59074 171 aa14.5□□□□□ -0.09
PDPN-208ENST00000509009 LAMC2Q13753 1193 aa14.5□□□□□ -0.09
PDPN-208ENST00000509009 CATIPQ7Z7H3 387 aa14.5□□□□□ -0.09
PDPN-208ENST00000509009 EMID1Q96A84 441 aaPredicted RBP14.5□□□□□ -0.09
PDPN-208ENST00000509009 LSG1Q9H089 658 aaKnown RBP14.5□□□□□ -0.09
PDPN-208ENST00000509009 MSRAQ9UJ68 235 aa14.5□□□□□ -0.09
PDPN-208ENST00000509009 MRVI1Q9Y6F6 885 aa14.5□□□□□ -0.09
PDPN-208ENST00000509009 SCN10AQ9Y5Y9 1956 aa14.5□□□□□ -0.09
PDPN-208ENST00000509009 IQCF3P0C7M6 154 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 PGM5Q15124 567 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 RAB30Q15771 203 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 DGKDQ16760 1214 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 MYSM1Q5VVJ2 828 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 KCNV1Q6PIU1 500 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 DEFB128Q7Z7B8 93 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 SESTD1Q86VW0 696 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 DHX37Q8IY37 1157 aaKnown RBP14.49□□□□□ -0.09
PDPN-208ENST00000509009 RETREG2Q8NC44 543 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 CTAGE1Q96RT6 745 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 MAP3K14Q99558 947 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 LY9Q9HBG7 655 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 SLC4A7Q9Y6M7 1214 aa14.49□□□□□ -0.09
PDPN-208ENST00000509009 CDH23Q9H251 3354 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 EYSQ5T1H1 3165 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 PITPNM1O00562 1244 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 PPFIA4O75335 1185 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 PFKMP08237 780 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 TGFB3P10600 412 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 SMARCA1P28370 1054 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 RFC2P35250 354 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 SP2Q02086 613 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 BFSP2Q13515 415 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 COL9A3Q14050 684 aaPredicted RBP14.48□□□□□ -0.09
PDPN-208ENST00000509009 PTGISQ16647 500 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 GDF6Q6KF10 455 aaPredicted RBP14.48□□□□□ -0.09
PDPN-208ENST00000509009 FCHSD1Q86WN1 690 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 IL31RAQ8NI17 732 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 PPTC7Q8NI37 304 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 PIBF1Q8WXW3 757 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 ZFP91Q96JP5 570 aaPredicted RBP14.48□□□□□ -0.09
PDPN-208ENST00000509009 ESYT1Q9BSJ8 1104 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 MTA3Q9BTC8 594 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 PRDM12Q9H4Q4 367 aa14.48□□□□□ -0.09
PDPN-208ENST00000509009 YBX2Q9Y2T7 364 aaKnown RBP14.48□□□□□ -0.09
PDPN-208ENST00000509009 ZBBXA8MT70 800 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 SLC27A2O14975 620 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 PRC1O43663 620 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 HOXD8P13378 290 aaPredicted RBP14.47□□□□□ -0.09
PDPN-208ENST00000509009 PSEN2P49810 448 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 RABGGTBP53611 331 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 NECTIN1Q15223 517 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 CELF3Q5SZQ8 465 aaKnown RBP14.47□□□□□ -0.09
PDPN-208ENST00000509009 CASC1Q6TDU7 716 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 ZNF654Q8IZM8 581 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 TMTC2Q8N394 836 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 MYL10Q9BUA6 226 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 NKX2-4Q9H2Z4 354 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 SLC28A3Q9HAS3 691 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 HDAC6Q9UBN7 1215 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 NOD1Q9Y239 953 aa14.47□□□□□ -0.09
PDPN-208ENST00000509009 HAS3O00219 553 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 DDAH1O94760 285 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 MYOGP15173 224 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 ATP2A2P16615 1042 aaKnown RBP14.46□□□□□ -0.09
PDPN-208ENST00000509009 CCND2P30279 289 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 MCM5P33992 734 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 GPNMBQ14956 572 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 HSDL1Q3SXM5 330 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 C7orf31Q8N865 590 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 GPKOWQ92917 476 aaPredicted RBP eCLIP14.46□□□□□ -0.09
PDPN-208ENST00000509009 TMEM87BQ96K49 555 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 ALG1Q9BT22 464 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 SPZ1Q9BXG8 430 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 COL25A1Q9BXS0 654 aaPredicted RBP14.46□□□□□ -0.09
PDPN-208ENST00000509009 FTOQ9C0B1 505 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDPN-208ENST00000509009 BCAS3Q9H6U6 928 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 PCDHA11Q9Y5I1 949 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 MYH6P13533 1939 aa14.46□□□□□ -0.09
PDPN-208ENST00000509009 CHD7Q9P2D1 2997 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 SH2B2O14492 632 aaPredicted RBP14.45□□□□□ -0.1
PDPN-208ENST00000509009 SORBS3O60504 671 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 GGPS1O95749 300 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 F2P00734 622 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 ACTN1P12814 892 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 KIF5BP33176 963 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms