RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 FOSL2P15408 326 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 DNAJB2P25686 324 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 KIF5BP33176 963 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 PTPN11Q06124 597 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 LAMC2Q13753 1193 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 CCDC62Q6P9F0 684 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 KCNV1Q6PIU1 500 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 OTOP2Q7RTS6 562 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 FCHSD1Q86WN1 690 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 TMTC2Q8N394 836 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 MYLIPQ8WY64 445 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 HERVK_113Q902F9 699 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 TTYH1Q9H313 450 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 LRRC37A2A6NM11 1700 aa11.69□□□□□ -0.54
UBE2D3-227ENST00000508818 CCDC69A6NI79 296 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 ARIH2O95376 493 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 ACTN1P12814 892 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 MCM5P33992 734 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 HSD17B4P51659 736 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 TROAPQ12815 778 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 BFSP2Q13515 415 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 RAB30Q15771 203 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 DGKDQ16760 1214 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 DHX37Q8IY37 1157 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 MAFAQ8NHW3 353 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 MTMR8Q96EF0 704 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 RRP36Q96EU6 259 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 SCLYQ96I15 445 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 ZNF576Q9H609 170 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 RIOX1Q9H6W3 641 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 SENP2Q9HC62 589 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 DDX41Q9UJV9 622 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 SLC4A7Q9Y6M7 1214 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 MYH6P13533 1939 aa11.68□□□□□ -0.54
UBE2D3-227ENST00000508818 GRXCR1A8MXD5 290 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 PRC1O43663 620 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 PPP1R11O60927 126 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 PFKMP08237 780 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 MMP3P08254 477 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 CCND2P30279 289 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 GNAQP50148 359 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 ARHGAP1Q07960 439 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 PTGISQ16647 500 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 STOX1Q6ZVD7 989 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 DEFB128Q7Z7B8 93 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 ZNF654Q8IZM8 581 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 C7orf31Q8N865 590 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 IGDCC4Q8TDY8 1250 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 PPP1R13LQ8WUF5 828 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 CUL5Q93034 780 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 LZTS2Q9BRK4 669 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 PDCD2LQ9BRP1 358 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 PBX4Q9BYU1 374 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.548e-9■□□□□ 8.1
UBE2D3-227ENST00000508818 WNT8AQ9H1J5 351 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 ANO2Q9NQ90 1003 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 SEC63Q9UGP8 760 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 TAF6LQ9Y6J9 622 aa11.67□□□□□ -0.54
UBE2D3-227ENST00000508818 DDAH1O94760 285 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 RFC2P35250 354 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 PBX2P40425 430 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 ANTXR2P58335 489 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 GRIN2CQ14957 1233 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 PGM5Q15124 567 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 RASIP1Q5U651 963 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 SYNE3Q6ZMZ3 975 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 VSIG10LQ86VR7 867 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.66□□□□□ -0.544e-11■□□□□ 10.1
UBE2D3-227ENST00000508818 SMARCC2Q8TAQ2 1214 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 TMEM87BQ96K49 555 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 GAS2L1Q99501 681 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 MAP3K14Q99558 947 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 ESYT1Q9BSJ8 1104 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 MTA3Q9BTC8 594 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 KATNAL1Q9BW62 490 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 MLXIPQ9HAP2 919 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 SLC28A3Q9HAS3 691 aa11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-227ENST00000508818 OPLAHO14841 1288 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 SLC27A2O14975 620 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 CYTH3O43739 400 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 SORBS3O60504 671 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 PPFIA4O75335 1185 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 CALM1P0DP23 149 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 CALM2P0DP24 149 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 CALM3P0DP25 149 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 TGFB3P10600 412 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 PSEN2P49810 448 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 GHRHRQ02643 423 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 GNPTABQ3T906 1256 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 CREB3L3Q68CJ9 461 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 CENPQQ7L2Z9 268 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 PPTC7Q8NI37 304 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms