RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 HOXA13P31271 388 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-216ENST00000507944 PBX2P40425 430 aa24.16■■□□□ 1.46
CLDND1-216ENST00000507944 GRIN2CQ14957 1233 aa24.16■■□□□ 1.46
CLDND1-216ENST00000507944 MAFAQ8NHW3 353 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-216ENST00000507944 ZNF576Q9H609 170 aa24.16■■□□□ 1.46
CLDND1-216ENST00000507944 CDH23Q9H251 3354 aa24.15■■□□□ 1.46
CLDND1-216ENST00000507944 PNMA6FA0A0J9YX94 578 aa24.15■■□□□ 1.46
CLDND1-216ENST00000507944 MYCLP12524 364 aaPredicted RBP24.15■■□□□ 1.46
CLDND1-216ENST00000507944 FOSL2P15408 326 aa24.15■■□□□ 1.46
CLDND1-216ENST00000507944 CASTP20810 708 aaKnown RBP24.15■■□□□ 1.46
CLDND1-216ENST00000507944 CHMP4BP1P59074 171 aa24.15■■□□□ 1.46
CLDND1-216ENST00000507944 PDCD2LQ9BRP1 358 aa24.15■■□□□ 1.46
CLDND1-216ENST00000507944 MRVI1Q9Y6F6 885 aa24.15■■□□□ 1.46
CLDND1-216ENST00000507944 TRIP12Q14669 1992 aaPredicted RBP24.14■■□□□ 1.46
CLDND1-216ENST00000507944 GCOM1H8Y6P7 765 aaPredicted RBP24.14■■□□□ 1.45
CLDND1-216ENST00000507944 POLR2MP0CAP2 368 aa24.14■■□□□ 1.45
CLDND1-216ENST00000507944 VWCEQ96DN2 955 aa24.14■■□□□ 1.45
CLDND1-216ENST00000507944 LAMC2Q13753 1193 aa24.13■■□□□ 1.45
CLDND1-216ENST00000507944 VSIG10LQ86VR7 867 aa24.13■■□□□ 1.45
CLDND1-216ENST00000507944 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.13■■□□□ 1.45
CLDND1-216ENST00000507944 EMID1Q96A84 441 aaPredicted RBP24.13■■□□□ 1.45
CLDND1-216ENST00000507944 LSG1Q9H089 658 aaKnown RBP24.13■■□□□ 1.45
CLDND1-216ENST00000507944 MSRAQ9UJ68 235 aa24.13■■□□□ 1.45
CLDND1-216ENST00000507944 NOD1Q9Y239 953 aa24.13■■□□□ 1.45
CLDND1-216ENST00000507944 SCN5AQ14524 2016 aa24.13■■□□□ 1.45
CLDND1-216ENST00000507944 PFKMP08237 780 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 PGM5Q15124 567 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 RAB30Q15771 203 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 DGKDQ16760 1214 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 CASC1Q6TDU7 716 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 DEFB128Q7Z7B8 93 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 FCHSD1Q86WN1 690 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 DHX37Q8IY37 1157 aaKnown RBP24.12■■□□□ 1.45
CLDND1-216ENST00000507944 RETREG2Q8NC44 543 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 KAT2BQ92831 832 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 ESYT1Q9BSJ8 1104 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 LY9Q9HBG7 655 aa24.12■■□□□ 1.45
CLDND1-216ENST00000507944 RGS20O76081 388 aa24.11■■□□□ 1.45
CLDND1-216ENST00000507944 KCNV1Q6PIU1 500 aa24.11■■□□□ 1.45
CLDND1-216ENST00000507944 ZNF654Q8IZM8 581 aa24.11■■□□□ 1.45
CLDND1-216ENST00000507944 PIBF1Q8WXW3 757 aa24.11■■□□□ 1.45
CLDND1-216ENST00000507944 MAP3K14Q99558 947 aa24.11■■□□□ 1.45
CLDND1-216ENST00000507944 MTA3Q9BTC8 594 aa24.11■■□□□ 1.45
CLDND1-216ENST00000507944 SLC4A7Q9Y6M7 1214 aa24.11■■□□□ 1.45
CLDND1-216ENST00000507944 PITPNM1O00562 1244 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 PRC1O43663 620 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 DDAH1O94760 285 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 MCM5P33992 734 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 BFSP2Q13515 415 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 PTGISQ16647 500 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 SESTD1Q86VW0 696 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 IL31RAQ8NI17 732 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 PPTC7Q8NI37 304 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 CTCFLQ8NI51 663 aaPredicted RBP24.1■■□□□ 1.45
CLDND1-216ENST00000507944 MYL10Q9BUA6 226 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 TET1Q8NFU7 2136 aa24.1■■□□□ 1.45
CLDND1-216ENST00000507944 ZBBXA8MT70 800 aa24.09■■□□□ 1.45
CLDND1-216ENST00000507944 SLC27A2O14975 620 aa24.09■■□□□ 1.45
CLDND1-216ENST00000507944 IQCF3P0C7M6 154 aa24.09■■□□□ 1.45
CLDND1-216ENST00000507944 CCND2P30279 289 aa24.09■■□□□ 1.45
CLDND1-216ENST00000507944 KIF5BP33176 963 aa24.09■■□□□ 1.45
CLDND1-216ENST00000507944 RFC2P35250 354 aa24.09■■□□□ 1.45
CLDND1-216ENST00000507944 GDF6Q6KF10 455 aaPredicted RBP24.09■■□□□ 1.45
CLDND1-216ENST00000507944 TMTC2Q8N394 836 aa24.09■■□□□ 1.45
CLDND1-216ENST00000507944 ZFP91Q96JP5 570 aaPredicted RBP24.09■■□□□ 1.45
CLDND1-216ENST00000507944 GBF1Q92538 1859 aa24.09■■□□□ 1.45
CLDND1-216ENST00000507944 TGFB3P10600 412 aa24.08■■□□□ 1.45
CLDND1-216ENST00000507944 SMARCA1P28370 1054 aa24.08■■□□□ 1.45
CLDND1-216ENST00000507944 CELF3Q5SZQ8 465 aaKnown RBP24.08■■□□□ 1.45
CLDND1-216ENST00000507944 MYSM1Q5VVJ2 828 aa24.08■■□□□ 1.45
CLDND1-216ENST00000507944 NFXL1Q6ZNB6 911 aa24.08■■□□□ 1.45
CLDND1-216ENST00000507944 TMEM87BQ96K49 555 aa24.08■■□□□ 1.45
CLDND1-216ENST00000507944 SPZ1Q9BXG8 430 aa24.08■■□□□ 1.45
CLDND1-216ENST00000507944 NKX2-4Q9H2Z4 354 aa24.08■■□□□ 1.45
CLDND1-216ENST00000507944 SH2B2O14492 632 aaPredicted RBP24.07■■□□□ 1.44
CLDND1-216ENST00000507944 PSEN2P49810 448 aa24.07■■□□□ 1.44
CLDND1-216ENST00000507944 NECTIN1Q15223 517 aa24.07■■□□□ 1.44
CLDND1-216ENST00000507944 CREB3L3Q68CJ9 461 aa24.07■■□□□ 1.44
CLDND1-216ENST00000507944 C7orf31Q8N865 590 aa24.07■■□□□ 1.44
CLDND1-216ENST00000507944 RRP36Q96EU6 259 aaKnown RBP24.07■■□□□ 1.44
CLDND1-216ENST00000507944 CTAGE1Q96RT6 745 aa24.07■■□□□ 1.44
CLDND1-216ENST00000507944 LZTS2Q9BRK4 669 aa24.07■■□□□ 1.44
CLDND1-216ENST00000507944 ALG1Q9BT22 464 aa24.07■■□□□ 1.44
CLDND1-216ENST00000507944 KATNAL1Q9BW62 490 aa24.07■■□□□ 1.44
CLDND1-216ENST00000507944 YBX2Q9Y2T7 364 aaKnown RBP24.07■■□□□ 1.44
CLDND1-216ENST00000507944 CCDC69A6NI79 296 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 SORBS3O60504 671 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 PPFIA4O75335 1185 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 GGPS1O95749 300 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 ZNF286BP0CG31 522 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 ACTN1P12814 892 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 GNAQP50148 359 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 RABGGTBP53611 331 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 SP2Q02086 613 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 COL9A3Q14050 684 aaPredicted RBP24.06■■□□□ 1.44
CLDND1-216ENST00000507944 CCDC155Q8N6L0 562 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 CAGE1Q8TC20 777 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 SPATA33Q96N06 139 aa24.06■■□□□ 1.44
CLDND1-216ENST00000507944 FTOQ9C0B1 505 aaKnown RBP eCLIP24.06■■□□□ 1.44
CLDND1-216ENST00000507944 PRDM12Q9H4Q4 367 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms