RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 KBTBD3Q8NAB2 608 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 NEDD1Q8NHV4 660 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 COPS5Q92905 334 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 MKL1Q969V6 931 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 VWCEQ96DN2 955 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 GPATCH3Q96I76 525 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 GMCL1Q96IK5 515 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 SLC9A7Q96T83 725 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 SEC62Q99442 399 aaKnown RBP6.82□□□□□ -1.32
GYPB-208ENST00000507009 MTG1Q9BT17 334 aaPredicted RBP6.82□□□□□ -1.32
GYPB-208ENST00000507009 NACAP1Q9BZK3 213 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 VTA1Q9NP79 307 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 GPCPD1Q9NPB8 672 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 ECHDC1Q9NTX5 307 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 DDX19BQ9UMR2 479 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 COG5Q9UP83 839 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 PRRC2BQ5JSZ5 2229 aaKnown RBP6.82□□□□□ -1.32
GYPB-208ENST00000507009 TANC1Q9C0D5 1861 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 RAD50Q92878 1312 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 LCHNA4D1U4 455 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 PATL2C9JE40 543 aaKnown RBP6.81□□□□□ -1.32
GYPB-208ENST00000507009 NFIBO00712 420 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 RANBP6O60518 1105 aaKnown RBP6.81□□□□□ -1.32
GYPB-208ENST00000507009 MS4A1P11836 297 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 GNAT2P19087 354 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 SSTR3P32745 418 aaPredicted RBP6.81□□□□□ -1.32
GYPB-208ENST00000507009 NKX3-2P78367 333 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 PPARAQ07869 468 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 PDE4DQ08499 809 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 PPP2R5BQ15173 497 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 DUSP28Q4G0W2 176 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 BRDTQ58F21 947 aaPredicted RBP6.81□□□□□ -1.32
GYPB-208ENST00000507009 RRP12Q5JTH9 1297 aaKnown RBP6.81□□□□□ -1.32
GYPB-208ENST00000507009 RCSD1Q6JBY9 416 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 EP400NLQ6ZTU2 488 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.81□□□□□ -1.32
GYPB-208ENST00000507009 CHST3Q7LGC8 479 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 ALYREFQ86V81 257 aaKnown RBP6.81□□□□□ -1.32
GYPB-208ENST00000507009 EPAS1Q99814 870 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 FSD1Q9BTV5 496 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 ZBTB40Q9NUA8 1239 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 ADD3Q9UEY8 706 aaKnown RBP6.81□□□□□ -1.32
GYPB-208ENST00000507009 PTPRSQ13332 1948 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 TRANK1O15050 2925 aa6.81□□□□□ -1.32
GYPB-208ENST00000507009 XIRP2A4UGR9 3374 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 SORBS3O60504 671 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 ICAM1P05362 532 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 ZFYP08048 801 aaPredicted RBP6.8□□□□□ -1.32
GYPB-208ENST00000507009 IQCF3P0C7M6 154 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 TXNP10599 105 aaKnown RBP6.8□□□□□ -1.32
GYPB-208ENST00000507009 RFC2P35250 354 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 DEFB103AP81534 67 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 BFSP2Q13515 415 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 PTGISQ16647 500 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 USH1GQ495M9 461 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 C6orf132Q5T0Z8 1188 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 SYDE2Q5VT97 1194 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 SEZ6LQ9BYH1 1024 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 CD320Q9NPF0 282 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 SYNPO2Q9UMS6 1093 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 Q9Y3F1 56 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 TRIP12Q14669 1992 aaPredicted RBP6.8□□□□□ -1.32
GYPB-208ENST00000507009 PLIN4Q96Q06 1357 aa6.8□□□□□ -1.32
GYPB-208ENST00000507009 KCNA5P22460 613 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 WDR5P61964 334 aaKnown RBP6.79□□□□□ -1.32
GYPB-208ENST00000507009 CSPP1Q1MSJ5 1256 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 LRRFIP1Q32MZ4 808 aaKnown RBP6.79□□□□□ -1.32
GYPB-208ENST00000507009 GDF6Q6KF10 455 aaPredicted RBP6.79□□□□□ -1.32
GYPB-208ENST00000507009 RNF207Q6ZRF8 634 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 LRRC8DQ7L1W4 858 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 ANKK1Q8NFD2 765 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 PHOSPHO2Q8TCD6 241 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 DDX12PQ92771 950 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 MPHOSPH6Q99547 160 aaKnown RBP6.79□□□□□ -1.32
GYPB-208ENST00000507009 ALG1Q9BT22 464 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 RANBP17Q9H2T7 1088 aaKnown RBP6.79□□□□□ -1.32
GYPB-208ENST00000507009 UBE2ZQ9H832 354 aaPredicted RBP6.79□□□□□ -1.32
GYPB-208ENST00000507009 IL17RBQ9NRM6 502 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 KIAA1468Q9P260 1216 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 TET1Q8NFU7 2136 aa6.79□□□□□ -1.32
GYPB-208ENST00000507009 NCOR1O75376 2440 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 H3BQ06 376 aaPredicted RBP6.78□□□□□ -1.32
GYPB-208ENST00000507009 LPXNO60711 386 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 CSPG5O95196 566 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 ARIH2O95376 493 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 IL9P15248 144 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 POU3F3P20264 500 aaPredicted RBP6.78□□□□□ -1.32
GYPB-208ENST00000507009 RPS6P62753 249 aaKnown RBP6.78□□□□□ -1.32
GYPB-208ENST00000507009 LY6KQ17RY6 165 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 TCTN1Q2MV58 587 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 C20orf194Q5TEA3 1177 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 NFRKBQ6P4R8 1299 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 SEPT14Q6ZU15 432 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 SPRYD3Q8NCJ5 442 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 MORC4Q8TE76 937 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 SCFD2Q8WU76 684 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 DCAF4Q8WV16 495 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 AFG1LQ8WV93 481 aa6.78□□□□□ -1.32
GYPB-208ENST00000507009 CHMP4BQ9H444 224 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms