RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 H0YHG0 523 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 XPOTO43592 962 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 RNF8O76064 485 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 AGR2O95994 175 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PTK2Q05397 1052 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SCRN1Q12765 414 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 LAPTM5Q13571 262 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SAFB2Q14151 953 aaKnown RBP eCLIP2.57□□□□□ -2
NEDD4-205ENST00000506154 PPP2R5DQ14738 602 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SF3B3Q15393 1217 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 TBC1D9BQ66K14 1250 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 C6orf15Q6UXA7 325 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 PODNQ7Z5L7 613 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ZNF34Q8IZ26 560 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 DEPDC7Q96QD5 511 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 DEF6Q9H4E7 631 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ETNK1Q9HBU6 452 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PCDHB14Q9Y5E9 798 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PALLDQ8WX93 1383 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TMEM238LA0A1B0GVL6 79 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 DCDC2BA2VCK2 349 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 UBAP1LF5GYI3 381 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CREB3O43889 395 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ST5P78524 1137 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PLOD1Q02809 727 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 SULT2A1Q06520 285 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 BRD3Q15059 726 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TUSC1Q2TAM9 212 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 FOXR1Q6PIV2 292 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TMEM151BQ8IW70 566 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CRACR2BQ8N4Y2 399 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 NKAIN3Q8N8D7 197 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ANKRD20A12PQ8NF67 263 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 RSPH1Q8WYR4 309 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 WNT2BQ93097 391 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 RNPC3Q96LT9 517 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 SLC52A2Q9HAB3 445 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 IFT122Q9HBG6 1241 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 LRP2BPQ9P2M1 347 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 STAP2Q9UGK3 403 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SAP30BPQ9UHR5 308 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 SPG7Q9UQ90 795 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CNTNAP1P78357 1384 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PLXNB2O15031 1838 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SRRM3A6NNA2 597 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 SMNDC1O75940 238 aaKnown RBP eCLIP2.57□□□□□ -2
NEDD4-205ENST00000506154 GJB6O95452 261 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SYT1P21579 422 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PEX5P50542 639 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 NUCB2P80303 420 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 KBTBD12Q3ZCT8 623 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TTC31Q49AM3 519 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 MIS18BP1Q6P0N0 1132 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ESX1Q8N693 406 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 EMID1Q96A84 441 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 GPRASP2Q96D09 838 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TRIM6Q9C030 488 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 RMI1Q9H9A7 625 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 IRAK4Q9NWZ3 460 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PYCARDQ9ULZ3 195 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CCDC194A0A1B0GVG4 234 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 E2F6O75461 281 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PDGFAP04085 211 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SMARCA1P28370 1054 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 CRKP46108 304 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 AMPD3Q01432 767 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 ZYXQ15942 572 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 ZNF362Q5T0B9 420 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 DTHD1Q6ZMT9 781 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PTF1AQ7RTS3 328 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 LIMS2Q7Z4I7 341 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 STRA8Q7Z7C7 330 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 RPS6KC1Q96S38 1066 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 RUBCNLQ9H714 662 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SEPSECSQ9HD40 501 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 PICK1Q9NRD5 415 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 LUC7L2Q9Y383 392 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 N6AMT1Q9Y5N5 214 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 NR2E3Q9Y5X4 410 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SIP14410 1827 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 LDHAP00338 332 aaKnown RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 LINGO3P0C6S8 592 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 NEDD9Q14511 834 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 PLCB4Q15147 1175 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SLC27A3Q5K4L6 730 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 TRAF7Q6Q0C0 670 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 LMBR1LQ6UX01 489 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 RSPH3Q86UC2 560 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 EXOC3L1Q86VI1 746 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 FBXL16Q8N461 479 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SH2D3CQ8N5H7 860 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 C8orf58Q8NAV2 365 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 FAM81AQ8TBF8 368 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 FBXO41Q8TF61 875 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SCYL1Q96KG9 808 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 SERINC2Q96SA4 455 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 CGREF1Q99674 301 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 ATP6V0A4Q9HBG4 840 aa2.56□□□□□ -2
NEDD4-205ENST00000506154 CORO1CQ9ULV4 474 aaPredicted RBP2.56□□□□□ -2
NEDD4-205ENST00000506154 GRIN2DO15399 1336 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms