RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 UBA5Q9GZZ9 404 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 MTIF3Q9H2K0 278 aaKnown RBP6.88□□□□□ -1.31
GYPB-205ENST00000505583 POLR3EQ9NVU0 708 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 PCDHA11Q9Y5I1 949 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 PRRC2BQ5JSZ5 2229 aaKnown RBP6.87□□□□□ -1.31
GYPB-205ENST00000505583 ZMYM6O95789 1325 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 WDR19Q8NEZ3 1342 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 LOC102724159A0A0B4J2E5 919 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 SUPT20HL2P0C7V6 817 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 BMP1P13497 986 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 COL9A1P20849 921 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 CPT1AP50416 773 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 MRPS5P82675 430 aaKnown RBP6.87□□□□□ -1.31
GYPB-205ENST00000505583 TAP1Q03518 808 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 ARHGAP1Q07960 439 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
GYPB-205ENST00000505583 PPP2R5BQ15173 497 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 PWP2Q15269 919 aaKnown RBP6.87□□□□□ -1.31
GYPB-205ENST00000505583 LY6KQ17RY6 165 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 ASTLQ6HA08 431 aaPredicted RBP6.87□□□□□ -1.31
GYPB-205ENST00000505583 GDF6Q6KF10 455 aaPredicted RBP6.87□□□□□ -1.31
GYPB-205ENST00000505583 NFRKBQ6P4R8 1299 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 MFSD6Q6ZSS7 791 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 SCFD2Q8WU76 684 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 AFG1LQ8WV93 481 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 DHX38Q92620 1227 aaKnown RBP6.87□□□□□ -1.31
GYPB-205ENST00000505583 KAT2BQ92831 832 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 TTC14Q96N46 770 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 SEZ6LQ9BYH1 1024 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 MTCH2Q9Y6C9 303 aa6.87□□□□□ -1.31
GYPB-205ENST00000505583 DOCK5Q9H7D0 1870 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 TRIM6-TRIM34B2RNG4 842 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 B4E1Z4 1266 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 OPLAHO14841 1288 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 LPXNO60711 386 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 KDM4AO75164 1064 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 IGHDP01880 384 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 PFKMP08237 780 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 MMP3P08254 477 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 SDSP20132 328 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 HIC1Q14526 733 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 CDC37Q16543 378 aaPredicted RBP6.86□□□□□ -1.31
GYPB-205ENST00000505583 TMEM67Q5HYA8 995 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 B4GALNT3Q6L9W6 998 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 SEPT14Q6ZU15 432 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 HERC6Q8IVU3 1022 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 ADGRF4Q8IZF3 695 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 DNERQ8NFT8 737 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 SYTL5Q8TDW5 730 aaPredicted RBP6.86□□□□□ -1.31
GYPB-205ENST00000505583 ARNTL2Q8WYA1 636 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 WNT8BQ93098 351 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 RILPL2Q969X0 211 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 UHRF1Q96T88 793 aaPredicted RBP6.86□□□□□ -1.31
GYPB-205ENST00000505583 LARP6Q9BRS8 491 aaKnown RBP6.86□□□□□ -1.31
GYPB-205ENST00000505583 IL25Q9H293 177 aa6.86□□□□□ -1.31
GYPB-205ENST00000505583 GPHNQ9NQX3 736 aaPredicted RBP6.86□□□□□ -1.31
GYPB-205ENST00000505583 SIP14410 1827 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 TRANK1O15050 2925 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 NKRFO15226 690 aaKnown RBP eCLIP6.85□□□□□ -1.31
GYPB-205ENST00000505583 SORBS3O60504 671 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 KPNA6O60684 536 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 PPP1R11O60927 126 aaPredicted RBP6.85□□□□□ -1.31
GYPB-205ENST00000505583 NBNO60934 754 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
GYPB-205ENST00000505583 PDE4AP27815 886 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 WDR5P61964 334 aaKnown RBP6.85□□□□□ -1.31
GYPB-205ENST00000505583 DEFB103AP81534 67 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 ZNF200P98182 395 aaPredicted RBP6.85□□□□□ -1.31
GYPB-205ENST00000505583 PTPN11Q06124 597 aaPredicted RBP6.85□□□□□ -1.31
GYPB-205ENST00000505583 GRB10Q13322 594 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 PTGISQ16647 500 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 SLC35G1Q2M3R5 365 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 QRICH1Q2TAL8 776 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 TRAF7Q6Q0C0 670 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 CWC27Q6UX04 472 aaKnown RBP6.85□□□□□ -1.31
GYPB-205ENST00000505583 DGKHQ86XP1 1220 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 PLEKHM2Q8IWE5 1019 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 SMC5Q8IY18 1101 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 ENAHQ8N8S7 591 aaPredicted RBP6.85□□□□□ -1.31
GYPB-205ENST00000505583 RETREG2Q8NC44 543 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 PNMA1Q8ND90 353 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 RGS22Q8NE09 1264 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 ANKS1AQ92625 1134 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 ESR2Q92731 530 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 SLC9A7Q96T83 725 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 RMDN3Q96TC7 470 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 OSBPL7Q9BZF2 842 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 FTOQ9C0B1 505 aaKnown RBP eCLIP6.85□□□□□ -1.31
GYPB-205ENST00000505583 JMJD4Q9H9V9 463 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 VAT1LQ9HCJ6 419 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 ZSWIM5Q9P217 1185 aa6.85□□□□□ -1.31
GYPB-205ENST00000505583 DDX41Q9UJV9 622 aaKnown RBP6.85□□□□□ -1.31
GYPB-205ENST00000505583 ABCB11O95342 1321 aa6.84□□□□□ -1.31
GYPB-205ENST00000505583 RAD50Q92878 1312 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms