RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 UBE2SQ16763 222 aa23.19■■□□□ 1.3
HERC6-205ENST00000504905 ME3Q16798 604 aa23.19■■□□□ 1.3
HERC6-205ENST00000504905 GJC2Q5T442 439 aaPredicted RBP23.19■■□□□ 1.3
HERC6-205ENST00000504905 CCDC12Q8WUD4 166 aaPredicted RBP23.19■■□□□ 1.3
HERC6-205ENST00000504905 RIC8AQ9NPQ8 531 aa23.19■■□□□ 1.3
HERC6-205ENST00000504905 SYNRGQ9UMZ2 1314 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 SMCO2A6NFE2 343 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 EIF3JO75822 258 aaKnown RBP23.18■■□□□ 1.3
HERC6-205ENST00000504905 CCND2P30279 289 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 LRRC41Q15345 812 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 RNF180Q86T96 592 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 TEX2Q8IWB9 1127 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 SCFD2Q8WU76 684 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 TBC1D32Q96NH3 1257 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 WDR11Q9BZH6 1224 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 GLT8D2Q9H1C3 349 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 SPC25Q9HBM1 224 aa23.18■■□□□ 1.3
HERC6-205ENST00000504905 FRMPD4Q14CM0 1322 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 RBM47A0AV96 593 aaKnown RBP23.17■■□□□ 1.3
HERC6-205ENST00000504905 SPDYE3A6NKU9 549 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 DEXIO95424 95 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 LARGE1O95461 756 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 SMPD1P17405 629 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 SEPT14Q6ZU15 432 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 NECAB1Q8N987 351 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 IL31RAQ8NI17 732 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 LIMCH1Q9UPQ0 1083 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 CUL9Q8IWT3 2517 aa23.17■■□□□ 1.3
HERC6-205ENST00000504905 ADAMTS4O75173 837 aa23.16■■□□□ 1.3
HERC6-205ENST00000504905 C6orf222P0C671 652 aaPredicted RBP23.16■■□□□ 1.3
HERC6-205ENST00000504905 TTLL4Q14679 1199 aa23.16■■□□□ 1.3
HERC6-205ENST00000504905 DUSP28Q4G0W2 176 aa23.16■■□□□ 1.3
HERC6-205ENST00000504905 TLK2Q86UE8 772 aa23.16■■□□□ 1.3
HERC6-205ENST00000504905 VSIG10LQ86VR7 867 aa23.16■■□□□ 1.3
HERC6-205ENST00000504905 CCDC148Q8NFR7 591 aa23.16■■□□□ 1.3
HERC6-205ENST00000504905 GTF3C6Q969F1 213 aa23.16■■□□□ 1.3
HERC6-205ENST00000504905 GNEQ9Y223 722 aaKnown RBP23.16■■□□□ 1.3
HERC6-205ENST00000504905 ESYT2A0FGR8 921 aa23.15■■□□□ 1.3
HERC6-205ENST00000504905 GJA9P57773 515 aa23.15■■□□□ 1.3
HERC6-205ENST00000504905 LRRC26Q2I0M4 334 aa23.15■■□□□ 1.3
HERC6-205ENST00000504905 AP5M1Q9H0R1 490 aa23.15■■□□□ 1.3
HERC6-205ENST00000504905 UPF3AQ9H1J1 476 aaKnown RBP23.15■■□□□ 1.3
HERC6-205ENST00000504905 EHMT1Q9H9B1 1298 aa23.15■■□□□ 1.3
HERC6-205ENST00000504905 C6orf50Q9HD87 102 aa23.15■■□□□ 1.3
HERC6-205ENST00000504905 DNAH12Q6ZR08 3092 aa23.14■■□□□ 1.29
HERC6-205ENST00000504905 DYNC1LI2O43237 492 aaPredicted RBP23.14■■□□□ 1.29
HERC6-205ENST00000504905 TMEM63BQ5T3F8 832 aa23.14■■□□□ 1.29
HERC6-205ENST00000504905 ZMYND12Q9H0C1 365 aa23.14■■□□□ 1.29
HERC6-205ENST00000504905 SH3GLB2Q9NR46 395 aa23.14■■□□□ 1.29
HERC6-205ENST00000504905 VPS54Q9P1Q0 977 aa23.14■■□□□ 1.29
HERC6-205ENST00000504905 PCDHA6Q9UN73 950 aa23.14■■□□□ 1.29
HERC6-205ENST00000504905 Q9Y3F1 56 aa23.14■■□□□ 1.29
HERC6-205ENST00000504905 PCDHA8Q9Y5H6 950 aa23.14■■□□□ 1.29
HERC6-205ENST00000504905 STK36Q9NRP7 1315 aa23.13■■□□□ 1.29
HERC6-205ENST00000504905 NKRFO15226 690 aaKnown RBP eCLIP23.13■■□□□ 1.29
HERC6-205ENST00000504905 ST18O60284 1047 aa23.13■■□□□ 1.29
HERC6-205ENST00000504905 FOSP01100 380 aaPredicted RBP23.13■■□□□ 1.29
HERC6-205ENST00000504905 TXNP10599 105 aaKnown RBP23.13■■□□□ 1.29
HERC6-205ENST00000504905 GNA11P29992 359 aa23.13■■□□□ 1.29
HERC6-205ENST00000504905 KLHDC9Q8NEP7 349 aa23.13■■□□□ 1.29
HERC6-205ENST00000504905 IL27Q8NEV9 243 aa23.13■■□□□ 1.29
HERC6-205ENST00000504905 ZSCAN31Q96LW9 406 aaPredicted RBP23.13■■□□□ 1.29
HERC6-205ENST00000504905 SENP6Q9GZR1 1112 aaPredicted RBP23.13■■□□□ 1.29
HERC6-205ENST00000504905 UNC80Q8N2C7 3258 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 MYADML2A6NDP7 307 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 STAM2O75886 525 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 CTDNEP1O95476 244 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 PTGS1P23219 599 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 CST5P28325 142 aaPredicted RBP23.12■■□□□ 1.29
HERC6-205ENST00000504905 AP3B2Q13367 1082 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 GNASQ5JWF2 1037 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 PCNX4Q63HM2 1172 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 XRRA1Q6P2D8 792 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 PCSK9Q8NBP7 692 aaKnown RBP23.12■■□□□ 1.29
HERC6-205ENST00000504905 OR6J1Q8NGC5 347 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 BICD2Q8TD16 824 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 ZFP91Q96JP5 570 aaPredicted RBP23.12■■□□□ 1.29
HERC6-205ENST00000504905 TSEN34Q9BSV6 310 aaKnown RBP23.12■■□□□ 1.29
HERC6-205ENST00000504905 MRVI1Q9Y6F6 885 aa23.12■■□□□ 1.29
HERC6-205ENST00000504905 ARIH2O95376 493 aa23.11■■□□□ 1.29
HERC6-205ENST00000504905 CLK2P49760 499 aaKnown RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 NLRP5P59047 1200 aa23.11■■□□□ 1.29
HERC6-205ENST00000504905 NKX3-2P78367 333 aa23.11■■□□□ 1.29
HERC6-205ENST00000504905 IRX5P78411 483 aaPredicted RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 MRPS9P82933 396 aaKnown RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 MDM2Q00987 491 aaPredicted RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 KCNA10Q16322 511 aa23.11■■□□□ 1.29
HERC6-205ENST00000504905 FSCN1Q16658 493 aaKnown RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 GNPTABQ3T906 1256 aa23.11■■□□□ 1.29
HERC6-205ENST00000504905 FAM109BQ6ICB4 259 aaPredicted RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 CCDC62Q6P9F0 684 aa23.11■■□□□ 1.29
HERC6-205ENST00000504905 REXO1Q8N1G1 1221 aaKnown RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 SH2B1Q9NRF2 756 aaPredicted RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 TMEM260Q9NX78 707 aa23.11■■□□□ 1.29
HERC6-205ENST00000504905 ORC3Q9UBD5 711 aaPredicted RBP23.11■■□□□ 1.29
HERC6-205ENST00000504905 PHF24Q9UPV7 400 aa23.11■■□□□ 1.29
HERC6-205ENST00000504905 MYH7BA7E2Y1 1941 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 RGS20O76081 388 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 BEX3Q00994 111 aa23.1■■□□□ 1.29
HERC6-205ENST00000504905 LY6KQ17RY6 165 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms