RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 TRIM61Q5EBN2 209 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 ZNF648Q5T619 568 aaPredicted RBP7.47□□□□□ -1.21
RFC1-204ENST00000502706 CDCP2Q5VXM1 449 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 SMAP1Q8IYB5 467 aaPredicted RBP7.47□□□□□ -1.21
RFC1-204ENST00000502706 FLCNQ8NFG4 579 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 POP1Q99575 1024 aaKnown RBP7.47□□□□□ -1.21
RFC1-204ENST00000502706 CNNM2Q9H8M5 875 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 NDOR1Q9UHB4 597 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 PUF60Q9UHX1 559 aaKnown RBP7.47□□□□□ -1.21
RFC1-204ENST00000502706 LZTS1Q9Y250 596 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 LUC7L2Q9Y383 392 aaKnown RBP7.47□□□□□ -1.21
RFC1-204ENST00000502706 TNPO3Q9Y5L0 923 aaKnown RBP7.47□□□□□ -1.21
RFC1-204ENST00000502706 RPS6KL1Q9Y6S9 549 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 SCAF11Q99590 1463 aaKnown RBP7.47□□□□□ -1.21
RFC1-204ENST00000502706 CEP152O94986 1710 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 UBR1Q8IWV7 1749 aa7.47□□□□□ -1.21
RFC1-204ENST00000502706 FAM95CA0A1B0GW59 222 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 ANKRD34BA5PLL1 514 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 KPNA6O60684 536 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 EFCAB14O75071 495 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 PAPLNO95428 1278 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 MYL3P08590 195 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 FGFR1P11362 822 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 CCND1P24385 295 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 TRAPPC10P48553 1259 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 PPP2R2AP63151 447 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 ZNF423Q2M1K9 1284 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 FAM83BQ5T0W9 1011 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 MAP1SQ66K74 1059 aaPredicted RBP7.46□□□□□ -1.22
RFC1-204ENST00000502706 ERAP2Q6P179 960 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 NSMFQ6X4W1 530 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 SPOCD1Q6ZMY3 1216 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 MORC1Q86VD1 984 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 GPATCH11Q8N954 259 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 OR2W6PQ8NHA6 318 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 PI4K2BQ8TCG2 481 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 COG1Q8WTW3 980 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 ZHX3Q9H4I2 956 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 TRIM39Q9HCM9 518 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 PAK6Q9NQU5 681 aaPredicted RBP7.46□□□□□ -1.22
RFC1-204ENST00000502706 RCAN3Q9UKA8 241 aa7.46□□□□□ -1.22
RFC1-204ENST00000502706 APOBEC2Q9Y235 224 aaKnown RBP7.46□□□□□ -1.22
RFC1-204ENST00000502706 MROH1Q8NDA8 1641 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 ANO9A1A5B4 782 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 RASSF10A6NK89 507 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 GFRA2O00451 464 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 NEMP1O14524 444 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 PRODHO43272 600 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 SNUPNO95149 360 aaKnown RBP7.45□□□□□ -1.22
RFC1-204ENST00000502706 JMJD7P0C870 316 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 PABPC1P11940 636 aaKnown RBP7.45□□□□□ -1.22
RFC1-204ENST00000502706 PHKG2P15735 406 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 PLCG1P19174 1290 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 SEPT7Q16181 437 aaKnown RBP7.45□□□□□ -1.22
RFC1-204ENST00000502706 PTPN21Q16825 1174 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 WIPI1Q5MNZ9 446 aaPredicted RBP7.45□□□□□ -1.22
RFC1-204ENST00000502706 ANO1Q5XXA6 986 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 PAOXQ6QHF9 649 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 UBE2R2Q712K3 238 aaPredicted RBP7.45□□□□□ -1.22
RFC1-204ENST00000502706 HDGFL2Q7Z4V5 671 aaPredicted RBP7.45□□□□□ -1.22
RFC1-204ENST00000502706 BRAPQ7Z569 592 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 TPH2Q8IWU9 490 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 FAM9BQ8IZU0 186 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 SLC7A14Q8TBB6 771 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 USP33Q8TEY7 942 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 RUNDC1Q96C34 613 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 TIFAQ96CG3 184 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 DHRS1Q96LJ7 313 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 MTA3Q9BTC8 594 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 MENTQ9BUN1 341 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 SUCOQ9UBS9 1254 aaKnown RBP7.45□□□□□ -1.22
RFC1-204ENST00000502706 RGS17Q9UGC6 210 aaPredicted RBP7.45□□□□□ -1.22
RFC1-204ENST00000502706 CORINQ9Y5Q5 1042 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 SNCAIPQ9Y6H5 919 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 SCINQ9Y6U3 715 aa7.45□□□□□ -1.22
RFC1-204ENST00000502706 SLIT1O75093 1534 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 PTMSP20962 102 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 IGFALSP35858 605 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 CDK8P49336 464 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 PPM1FP49593 454 aaPredicted RBP7.44□□□□□ -1.22
RFC1-204ENST00000502706 SCNN1BP51168 640 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 GABREP78334 506 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 PDE4BQ07343 736 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 NFKBIBQ15653 356 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 CFAP100Q494V2 611 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 NUTM2GQ5VZR2 741 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 CCDC70Q6NSX1 233 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 PDZD3Q86UT5 571 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 SHISA5Q8N114 240 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 CPXCR1Q8N123 301 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 C12orf50Q8NA57 414 aaPredicted RBP7.44□□□□□ -1.22
RFC1-204ENST00000502706 TEX19Q8NA77 164 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 SMG8Q8ND04 991 aaKnown RBP7.44□□□□□ -1.22
RFC1-204ENST00000502706 LRRN4CLQ8ND94 238 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 PPP1R14AQ96A00 147 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 ACSBG1Q96GR2 724 aa7.44□□□□□ -1.22
RFC1-204ENST00000502706 STRBPQ96SI9 672 aaKnown RBP7.44□□□□□ -1.22
RFC1-204ENST00000502706 ELAC2Q9BQ52 826 aaKnown RBP7.44□□□□□ -1.22
RFC1-204ENST00000502706 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms