RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SEMA4GQ9NTN9 838 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 CHPF2Q9P2E5 772 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 INSL6Q9Y581 213 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 PCDHGA2Q9Y5H1 932 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 GREB1Q4ZG55 1949 aa6.5□□□□□ -1.37
FXN-205ENST00000498653 MIA3Q5JRA6 1907 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 LRP3O75074 770 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 ENTPD3O75355 529 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 CSPG5O95196 566 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 SMPD1P17405 629 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 ERCC3P19447 782 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 POU3F2P20265 443 aaPredicted RBP6.49□□□□□ -1.37
FXN-205ENST00000498653 ITGA6P23229 1130 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 LIMK1P53667 647 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 JAG1P78504 1218 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 RBM10P98175 930 aaKnown RBP6.49□□□□□ -1.37
FXN-205ENST00000498653 BEX3Q00994 111 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 KCNC4Q03721 635 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 TBC1D8BQ0IIM8 1120 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 TROAPQ12815 778 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 CHAF1AQ13111 956 aaPredicted RBP6.49□□□□□ -1.37
FXN-205ENST00000498653 TUSC1Q2TAM9 212 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 ZNF528Q3MIS6 628 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 GNASQ5JWF2 1037 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 ABRAQ8N0Z2 381 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 CCDC191Q8NCU4 936 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 WHAMMQ8TF30 809 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.49□□□□□ -1.37
FXN-205ENST00000498653 LRIG1Q96JA1 1093 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 MPHOSPH8Q99549 860 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 IDI2Q9BXS1 227 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 AS3MTQ9HBK9 375 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 DDX4Q9NQI0 724 aaKnown RBP6.49□□□□□ -1.37
FXN-205ENST00000498653 POLR3EQ9NVU0 708 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 SLC5A4Q9NY91 659 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 SALL2Q9Y467 1007 aaPredicted RBP6.49□□□□□ -1.37
FXN-205ENST00000498653 DENND4AQ7Z401 1863 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 ASTN1O14525 1302 aa6.49□□□□□ -1.37
FXN-205ENST00000498653 COL5A1P20908 1838 aaPredicted RBP6.48□□□□□ -1.37
FXN-205ENST00000498653 PARP14Q460N5 1801 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 KIAA1671Q9BY89 1806 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 C5orf67F2Z3F1 127 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 MMP1P03956 469 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 DCNP07585 359 aaKnown RBP6.48□□□□□ -1.37
FXN-205ENST00000498653 GLULP15104 373 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 NDUFV2P19404 249 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 PSMC6P62333 389 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 ZNF252P-AS1Q0IIN9 211 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 CSRP2Q16527 193 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 SHROOM1Q2M3G4 852 aaPredicted RBP6.48□□□□□ -1.37
FXN-205ENST00000498653 SPECC1Q5M775 1068 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 SCUBE3Q8IX30 993 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 CCDC146Q8IYE0 955 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 VN1R2Q8NFZ6 395 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 TBC1D22AQ8WUA7 517 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 NANOS1Q8WY41 292 aaKnown RBP6.48□□□□□ -1.37
FXN-205ENST00000498653 NELL1Q92832 810 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 UBL7Q96S82 380 aaPredicted RBP6.48□□□□□ -1.37
FXN-205ENST00000498653 CDH22Q9UJ99 828 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 FAM184BQ9ULE4 1060 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 IQSEC3Q9UPP2 1182 aaPredicted RBP6.48□□□□□ -1.37
FXN-205ENST00000498653 SLC27A5Q9Y2P5 690 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 COL6A6A6NMZ7 2263 aa6.48□□□□□ -1.37
FXN-205ENST00000498653 FLNCQ14315 2725 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 KRBA1A5PL33 1030 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 C19orf81C9J6K1 198 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 GIPC1O14908 333 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 TBC1D4O60343 1298 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 HIBADHP31937 336 aaKnown RBP6.47□□□□□ -1.37
FXN-205ENST00000498653 ZNF792Q3KQV3 632 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 CNKSR3Q6P9H4 555 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 ZSCAN29Q8IWY8 852 aaPredicted RBP6.47□□□□□ -1.37
FXN-205ENST00000498653 CRELD1Q96HD1 420 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 NEK1Q96PY6 1258 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 PLEKHF1Q96S99 279 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 MYD88Q99836 296 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 SEZ6LQ9BYH1 1024 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 S1PR5Q9H228 398 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 USP40Q9NVE5 1235 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 CWC25Q9NXE8 425 aaPredicted RBP6.47□□□□□ -1.37
FXN-205ENST00000498653 NR2E1Q9Y466 385 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 SCN10AQ9Y5Y9 1956 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 LRBAP50851 2863 aa6.47□□□□□ -1.37
FXN-205ENST00000498653 MYH2Q9UKX2 1941 aa6.46□□□□□ -1.37
FXN-205ENST00000498653 TSC2P49815 1807 aa6.46□□□□□ -1.37
FXN-205ENST00000498653 ITPR2Q14571 2701 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 USP17L10C9JJH3 530 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 ATXN7O15265 892 aaPredicted RBP6.46□□□□□ -1.38
FXN-205ENST00000498653 FRAT2O75474 233 aaPredicted RBP6.46□□□□□ -1.38
FXN-205ENST00000498653 CABYRO75952 493 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 SNAI1O95863 264 aaPredicted RBP6.46□□□□□ -1.38
FXN-205ENST00000498653 PGK2P07205 417 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 UBE4AQ14139 1066 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 COLEC12Q5KU26 742 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.46□□□□□ -1.38
FXN-205ENST00000498653 CATSPERGQ6ZRH7 1159 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 ATP8B4Q8TF62 1192 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 HNRNPLLQ8WVV9 542 aaKnown RBP6.46□□□□□ -1.38
FXN-205ENST00000498653 C12orf42Q96LP6 360 aa6.46□□□□□ -1.38
FXN-205ENST00000498653 PCNX1Q96RV3 2341 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms