RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 DPYDQ12882 1025 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 CUL4BQ13620 913 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 SLFN13Q68D06 897 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 RETREG2Q8NC44 543 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 NKX2-3Q8TAU0 364 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 DPF2Q92785 391 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 NOC4LQ9BVI4 516 aaKnown RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 MTIF3Q9H2K0 278 aaKnown RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 CPVLQ9H3G5 476 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 LZTFL1Q9NQ48 299 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 PI4KBQ9UBF8 816 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 MAD2L2Q9UI95 211 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 V9GYY5 206 aaPredicted RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 EEF1GP26641 437 aaKnown RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 GTF2F1P35269 517 aaKnown RBP eCLIP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 DNM2P50570 870 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 USP14P54578 494 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 TUBB4BP68371 445 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 FUT2Q10981 343 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 TUBB2AQ13885 445 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 HAUS3Q68CZ6 603 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 FOXP4Q8IVH2 680 aaPredicted RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 TUBB2BQ9BVA1 445 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 MTMR4Q9NYA4 1195 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 POLLQ9UGP5 575 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 ZNF215Q9UL58 517 aaPredicted RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 TRPC6Q9Y210 931 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 STK24Q9Y6E0 443 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 RP1L1Q8IWN7 2480 aaPredicted RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 CTAGE9A4FU28 777 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 STXBP3O00186 592 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 GH2P01242 217 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 HOXA7P31268 230 aaPredicted RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 PAFAH1B1P43034 410 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 FMR1Q06787 632 aaKnown RBP eCLIP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 SNAPC2Q13487 334 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 RCSD1Q6JBY9 416 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 ANKRD13AQ8IZ07 590 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 IQCDQ96DY2 449 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 ZMYND12Q9H0C1 365 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 FAM205AQ6ZU69 1335 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 KDM3AQ9Y4C1 1321 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 CBX1P83916 185 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 NOGQ13253 232 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 NT5DC1Q5TFE4 455 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 PPP1R18Q6NYC8 613 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 STXBP4Q6ZWJ1 553 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 CEP112Q8N8E3 955 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 OR8K1Q8NGG5 319 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 PANX2Q96RD6 677 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 IL17RBQ9NRM6 502 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCPG1Q9ULG6 757 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 PCDHA12Q9UN75 941 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 TJP1Q07157 1748 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 PAPPAQ13219 1627 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 ADM5C9JUS6 153 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 PLCG1P19174 1290 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 SARSP49591 514 aaKnown RBP8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 ZNF569Q5MCW4 686 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 HHIPL2Q6UWX4 724 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 KRT86O43790 486 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 AKR1B1P15121 316 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 FAM193AP78312 1265 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 KMT5BQ4FZB7 885 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 TDRD12Q587J7 1177 aaKnown RBP8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 ARHGEF16Q5VV41 709 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCDC84Q86UT8 332 aaPredicted RBP8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 CAPNS2Q96L46 248 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 DDX25Q9UHL0 483 aaKnown RBP8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 PCDHA1Q9Y5I3 950 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 PHLPP2Q6ZVD8 1323 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 ESYT2A0FGR8 921 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 TBCAO75347 108 aaKnown RBP8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 SRGNP10124 158 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 IGFBP4P22692 258 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCNE1P24864 410 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 GOLGA8FQ08AF8 430 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 GOLGA8DPQ0D2H9 430 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 KCNB1Q14721 858 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 CRY2Q49AN0 593 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 MAP9Q49MG5 647 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 EARS2Q5JPH6 523 aaKnown RBP8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 RSBN1LQ6PCB5 846 aaPredicted RBP8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 SEPT14Q6ZU15 432 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 FASTKD5Q7L8L6 764 aaKnown RBP8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 DYMQ7RTS9 669 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 MMRN2Q9H8L6 949 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 CPA4Q9UI42 421 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 GLI3P10071 1580 aa8.86□□□□□ -0.99
HLA-DMB-262ENST00000498020 USP27XA6NNY8 438 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 AKR1B10O60218 316 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 RBL2Q08999 1139 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 NFX1Q12986 1120 aaKnown RBP8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 KRT31Q15323 416 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 PTPN21Q16825 1174 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 ZNF384Q8TF68 577 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 LARP4BQ92615 738 aaKnown RBP8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 P2RX5Q93086 422 aa8.85□□□□□ -0.99
HLA-DMB-262ENST00000498020 LRFN2Q9ULH4 789 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms