RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 NKRFO15226 690 aaKnown RBP eCLIP12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 CFBP00751 764 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 CALM1P0DP23 149 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 CALM2P0DP24 149 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 CALM3P0DP25 149 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 EDNRBP24530 442 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 CPT1AP50416 773 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 CDK7P50613 346 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 BEX3Q00994 111 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 ARHGEF16Q5VV41 709 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 SYNE3Q6ZMZ3 975 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 TMEM199Q8N511 208 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 OR6J1Q8NGC5 347 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 SEZ6LQ9BYH1 1024 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 MTIF3Q9H2K0 278 aaKnown RBP12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 SLC28A3Q9HAS3 691 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 C11orf16Q9NQ32 467 aa12.14□□□□□ -0.47
ERGIC3-219ENST00000496172 PNMA6FA0A0J9YX94 578 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 ARVCFO00192 962 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 SH2B2O14492 632 aaPredicted RBP12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 CTAGE5O15320 804 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 CSF2RAP15509 400 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 SMARCA1P28370 1054 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 LIFRP42702 1097 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 KCNQ1P51787 676 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 TFF2Q03403 129 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 KRT32Q14532 448 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 TTLL4Q14679 1199 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 STXBP2Q15833 593 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 CXCL17Q6UXB2 119 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 ZNF365Q70YC5 407 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 TBC1D5Q92609 795 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 RRP36Q96EU6 259 aaKnown RBP12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 NEK1Q96PY6 1258 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 PIGSQ96S52 555 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 SEC63Q9UGP8 760 aaKnown RBP12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 SLC12A7Q9Y666 1083 aa12.13□□□□□ -0.47
ERGIC3-219ENST00000496172 GCOM1H8Y6P7 765 aaPredicted RBP12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 KPNA6O60684 536 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 PPP1R11O60927 126 aaPredicted RBP12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 HSD17B4P51659 736 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 PIBF1Q8WXW3 757 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 SNX27Q96L92 541 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 MYL10Q9BUA6 226 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 NKX2-4Q9H2Z4 354 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 POLR3EQ9NVU0 708 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 COG5Q9UP83 839 aa12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 YBX2Q9Y2T7 364 aaKnown RBP12.12□□□□□ -0.47
ERGIC3-219ENST00000496172 LCTP09848 1927 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 BRWD1Q9NSI6 2320 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 CYTH3O43739 400 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 HMGB1P09429 215 aaKnown RBP12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 EIF2AK2P19525 551 aaKnown RBP12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 GHRHRQ02643 423 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 ITGA7Q13683 1181 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 DHX32Q7L7V1 743 aaKnown RBP12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 FAM126BQ8IXS8 530 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 CUL5Q93034 780 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 SPZ1Q9BXG8 430 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 PXMP2Q9NR77 195 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 COL20A1Q9P218 1284 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 MYH6P13533 1939 aa12.11□□□□□ -0.47
ERGIC3-219ENST00000496172 TLL1O43897 1013 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 REC8O95072 547 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 NR3C2P08235 984 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 MYL3P08590 195 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 MYCLP12524 364 aaPredicted RBP12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 PTGS1P23219 599 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 HOXA13P31271 388 aaPredicted RBP12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 FGD1P98174 961 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 SLC35G1Q2M3R5 365 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 TMEM63BQ5T3F8 832 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 ERICH6BQ5W0A0 696 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 ALYREFQ86V81 257 aaKnown RBP12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 SGMS1Q86VZ5 419 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 PCDHA11Q9Y5I1 949 aa12.1□□□□□ -0.47
ERGIC3-219ENST00000496172 PI4K2BG5E9Z4 385 aa12.09□□□□□ -0.47
ERGIC3-219ENST00000496172 OPLAHO14841 1288 aa12.09□□□□□ -0.47
ERGIC3-219ENST00000496172 GH1P01241 217 aa12.09□□□□□ -0.47
ERGIC3-219ENST00000496172 CD4P01730 458 aa12.09□□□□□ -0.47
ERGIC3-219ENST00000496172 ACRP10323 421 aa12.09□□□□□ -0.47
ERGIC3-219ENST00000496172 RXRAP19793 462 aa12.09□□□□□ -0.47
ERGIC3-219ENST00000496172 CCND2P30279 289 aa12.09□□□□□ -0.47
ERGIC3-219ENST00000496172 PPP2R2DQ66LE6 453 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms