RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 ORC1Q13415 861 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 DSC3Q14574 896 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 NFIXQ14938 502 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 AKNAD1Q5T1N1 836 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 MSL1Q68DK7 614 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 RALYLQ86SE5 291 aaKnown RBP6.99□□□□□ -1.29
CPSF7-213ENST00000494016 COL23A1Q86Y22 540 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-213ENST00000494016 PDLIM2Q96JY6 352 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 ASB16Q96NS5 453 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 RIOK1Q9BRS2 568 aaKnown RBP6.99□□□□□ -1.29
CPSF7-213ENST00000494016 PLVAPQ9BX97 442 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 PBX4Q9BYU1 374 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 ANKRD2Q9GZV1 360 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 RASSF4Q9H2L5 321 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 LY9Q9HBG7 655 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 IGSF5Q9NSI5 407 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 GNL3LQ9NVN8 582 aaKnown RBP6.99□□□□□ -1.29
CPSF7-213ENST00000494016 TFCP2L1Q9NZI6 479 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 NOP53Q9NZM5 478 aaKnown RBP6.99□□□□□ -1.29
CPSF7-213ENST00000494016 LRP2BPQ9P2M1 347 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 ANAPC4Q9UJX5 808 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 NAP1L2Q9ULW6 460 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-213ENST00000494016 ANGEL1Q9UNK9 670 aaKnown RBP6.99□□□□□ -1.29
CPSF7-213ENST00000494016 SLC4A4Q9Y6R1 1079 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 CARMIL3Q8ND23 1372 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 SMIM22K7EJ46 135 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 TREHO43280 583 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 EDN3P14138 238 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 CDC27P30260 824 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 HIBADHP31937 336 aaKnown RBP6.98□□□□□ -1.29
CPSF7-213ENST00000494016 LIFRP42702 1097 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 DYNLL1P63167 89 aaKnown RBP6.98□□□□□ -1.29
CPSF7-213ENST00000494016 GUCY1B3Q02153 619 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 TRDNQ13061 729 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 NTRK3Q16288 839 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 CAVIN4Q5BKX8 364 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 ATL3Q6DD88 541 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 OTUD7BQ6GQQ9 843 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 GIMAP6Q6P9H5 292 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 ALYREFQ86V81 257 aaKnown RBP6.98□□□□□ -1.29
CPSF7-213ENST00000494016 TXNRD3Q86VQ6 643 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 SGMS1Q86VZ5 419 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 RAB11FIP4Q86YS3 637 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 ZSCAN29Q8IWY8 852 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-213ENST00000494016 GALNT12Q8IXK2 581 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 MIGA1Q8NAN2 632 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 FBXO18Q8NFZ0 1043 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 NLGN2Q8NFZ4 835 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 TMEM87BQ96K49 555 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 SPATA32Q96LK8 384 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 DNAJC25Q9H1X3 360 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 DZANK1Q9NVP4 752 aa6.98□□□□□ -1.29
CPSF7-213ENST00000494016 ORC3Q9UBD5 711 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-213ENST00000494016 PDS5AQ29RF7 1337 aaKnown RBP6.98□□□□□ -1.29
CPSF7-213ENST00000494016 TNRC6CQ9HCJ0 1690 aaKnown RBP6.97□□□□□ -1.29
CPSF7-213ENST00000494016 KIF13BQ9NQT8 1826 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 UNCXA6NJT0 531 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 SPDYE3A6NKU9 549 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 GOLGA8BA8MQT2 603 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 NFKBIEO00221 500 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 DHX16O60231 1041 aaKnown RBP6.97□□□□□ -1.29
CPSF7-213ENST00000494016 GRIN3BO60391 1043 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 CPNE3O75131 537 aaKnown RBP6.97□□□□□ -1.29
CPSF7-213ENST00000494016 SMNDC1O75940 238 aaKnown RBP eCLIP6.97□□□□□ -1.29
CPSF7-213ENST00000494016 FGRP09769 529 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 ACPPP15309 386 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 CEP135Q66GS9 1140 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 APOA5Q6Q788 366 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 RBM43Q6ZSC3 357 aaKnown RBP6.97□□□□□ -1.29
CPSF7-213ENST00000494016 MFSD6Q6ZSS7 791 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 SLC51AQ86UW1 340 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 TIAM2Q8IVF5 1701 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 CACTIN-AS1Q8N1I8 211 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 STAG1Q8WVM7 1258 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 NSUN4Q96CB9 384 aaKnown RBP6.97□□□□□ -1.29
CPSF7-213ENST00000494016 USP28Q96RU2 1077 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 NACAP1Q9BZK3 213 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 KRT23Q9C075 422 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 NAPBQ9H115 298 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 CNNM2Q9H8M5 875 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 GJB4Q9NTQ9 266 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 RTEL1Q9NZ71 1219 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 RAI14Q9P0K7 980 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 ABCF2Q9UG63 623 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 CFAP45Q9UL16 551 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 TRIM33Q9UPN9 1127 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 KIF3AQ9Y496 699 aa6.97□□□□□ -1.29
CPSF7-213ENST00000494016 MYH13Q9UKX3 1938 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 KIF28PB7ZC32 967 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 EIF1AYO14602 144 aaKnown RBP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 IFIT3O14879 490 aaKnown RBP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 ZBTB43O43298 467 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 POLR3DP05423 398 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 GYS1P13807 737 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 POLD1P28340 1107 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 TDO2P48775 406 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 METAP2P50579 478 aaKnown RBP eCLIP6.96□□□□□ -1.3
CPSF7-213ENST00000494016 PLCB3Q01970 1234 aa6.96□□□□□ -1.3
CPSF7-213ENST00000494016 MECOMQ03112 1051 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms