RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 IL31RAQ8NI17 732 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 IGDCC4Q8TDY8 1250 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 HERVK_113Q902F9 699 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 TIFAQ96CG3 184 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 PBX4Q9BYU1 374 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 MAF1Q9H063 256 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 LSG1Q9H089 658 aaKnown RBP17■□□□□ 0.31
ATG4B-223ENST00000493618 RIOX1Q9H6W3 641 aa17■□□□□ 0.31
ATG4B-223ENST00000493618 SUPT20HL2P0C7V6 817 aa16.99■□□□□ 0.31
ATG4B-223ENST00000493618 FOSL2P15408 326 aa16.99■□□□□ 0.31
ATG4B-223ENST00000493618 DEFB128Q7Z7B8 93 aa16.99■□□□□ 0.31
ATG4B-223ENST00000493618 FCHSD1Q86WN1 690 aa16.99■□□□□ 0.31
ATG4B-223ENST00000493618 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-223ENST00000493618 PDCD2LQ9BRP1 358 aa16.99■□□□□ 0.31
ATG4B-223ENST00000493618 LY9Q9HBG7 655 aa16.99■□□□□ 0.31
ATG4B-223ENST00000493618 DDX41Q9UJV9 622 aaKnown RBP16.99■□□□□ 0.31
ATG4B-223ENST00000493618 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
ATG4B-223ENST00000493618 PTPRSQ13332 1948 aa16.99■□□□□ 0.31
ATG4B-223ENST00000493618 PRC1O43663 620 aa16.98■□□□□ 0.31
ATG4B-223ENST00000493618 EIF3JO75822 258 aaKnown RBP16.98■□□□□ 0.31
ATG4B-223ENST00000493618 GHRHRQ02643 423 aa16.98■□□□□ 0.31
ATG4B-223ENST00000493618 PGM5Q15124 567 aa16.98■□□□□ 0.31
ATG4B-223ENST00000493618 NFRKBQ6P4R8 1299 aa16.98■□□□□ 0.31
ATG4B-223ENST00000493618 VWCEQ96DN2 955 aa16.98■□□□□ 0.31
ATG4B-223ENST00000493618 ESYT1Q9BSJ8 1104 aa16.98■□□□□ 0.31
ATG4B-223ENST00000493618 ZNF576Q9H609 170 aa16.98■□□□□ 0.31
ATG4B-223ENST00000493618 TMEM265A0A087WTH1 108 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 PNMA6FA0A0J9YX94 578 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 ZBBXA8MT70 800 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 GCOM1H8Y6P7 765 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-223ENST00000493618 RBAK-RBAKDNI3L0D1 243 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 SLC27A2O14975 620 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 RGS20O76081 388 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 POLR2MP0CAP2 368 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 CASC1Q6TDU7 716 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 RAB11FIP4Q86YS3 637 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 DHX37Q8IY37 1157 aaKnown RBP16.97■□□□□ 0.31
ATG4B-223ENST00000493618 RPUSD2Q8IZ73 545 aaKnown RBP16.97■□□□□ 0.31
ATG4B-223ENST00000493618 ZNF654Q8IZM8 581 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 KAT2BQ92831 832 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
ATG4B-223ENST00000493618 NOD1Q9Y239 953 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 TET1Q8NFU7 2136 aa16.97■□□□□ 0.31
ATG4B-223ENST00000493618 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 RXRAP19793 462 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
ATG4B-223ENST00000493618 RABGGTBP53611 331 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 PTGISQ16647 500 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 GDF6Q6KF10 455 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-223ENST00000493618 NFXL1Q6ZNB6 911 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATG4B-223ENST00000493618 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.31
ATG4B-223ENST00000493618 ALG1Q9BT22 464 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 LRRC2Q9BYS8 371 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 MTIF3Q9H2K0 278 aaKnown RBP16.96■□□□□ 0.31
ATG4B-223ENST00000493618 NKX2-4Q9H2Z4 354 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 ANO2Q9NQ90 1003 aa16.96■□□□□ 0.31
ATG4B-223ENST00000493618 PRUNE2Q8WUY3 3088 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 SH2B2O14492 632 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-223ENST00000493618 PLEKHA8P1O95397 391 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 CCND2P30279 289 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 PTPN11Q06124 597 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-223ENST00000493618 DGKDQ16760 1214 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 CREB3L3Q68CJ9 461 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 RETREG2Q8NC44 543 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 CTCFLQ8NI51 663 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-223ENST00000493618 MAP3K20Q9NYL2 800 aaKnown RBP16.95■□□□□ 0.3
ATG4B-223ENST00000493618 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
ATG4B-223ENST00000493618 SLC4A7Q9Y6M7 1214 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 CHD9Q3L8U1 2897 aa16.95■□□□□ 0.3
ATG4B-223ENST00000493618 CCDC69A6NI79 296 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 DDAH1O94760 285 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 GGPS1O95749 300 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 MYOGP15173 224 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 MCM5P33992 734 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 PSEN2P49810 448 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 SP2Q02086 613 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 TRAF1Q13077 416 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 LAMC2Q13753 1193 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 VSIG10LQ86VR7 867 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 PRDM12Q9H4Q4 367 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 HDAC6Q9UBN7 1215 aa16.94■□□□□ 0.3
ATG4B-223ENST00000493618 IQCF3P0C7M6 154 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 UBA1P22314 1058 aaKnown RBP16.93■□□□□ 0.3
ATG4B-223ENST00000493618 BFSP2Q13515 415 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 MFSD10Q14728 455 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 RAB30Q15771 203 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 CELF3Q5SZQ8 465 aaKnown RBP16.93■□□□□ 0.3
ATG4B-223ENST00000493618 MYSM1Q5VVJ2 828 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 SRBD1Q8N5C6 995 aaKnown RBP16.93■□□□□ 0.3
ATG4B-223ENST00000493618 SAMD3Q8N6K7 520 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 C7orf31Q8N865 590 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 PPTC7Q8NI37 304 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 EMID1Q96A84 441 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-223ENST00000493618 RRP36Q96EU6 259 aaKnown RBP16.93■□□□□ 0.3
ATG4B-223ENST00000493618 SPATA33Q96N06 139 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 CTAGE1Q96RT6 745 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 SPZ1Q9BXG8 430 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms