RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 DGKDQ16760 1214 aa18.94■□□□□ 0.62
C9orf78-206ENST00000492991 FAM47CQ5HY64 1035 aa18.94■□□□□ 0.62
C9orf78-206ENST00000492991 VSIG10LQ86VR7 867 aa18.94■□□□□ 0.62
C9orf78-206ENST00000492991 RETREG2Q8NC44 543 aa18.94■□□□□ 0.62
C9orf78-206ENST00000492991 PDCD2LQ9BRP1 358 aa18.94■□□□□ 0.62
C9orf78-206ENST00000492991 SLC4A7Q9Y6M7 1214 aa18.94■□□□□ 0.62
C9orf78-206ENST00000492991 PNMA6FA0A0J9YX94 578 aa18.93■□□□□ 0.62
C9orf78-206ENST00000492991 EIF2AK2P19525 551 aaKnown RBP18.93■□□□□ 0.62
C9orf78-206ENST00000492991 SMARCA1P28370 1054 aa18.93■□□□□ 0.62
C9orf78-206ENST00000492991 IGDCC4Q8TDY8 1250 aa18.93■□□□□ 0.62
C9orf78-206ENST00000492991 SCLYQ96I15 445 aa18.93■□□□□ 0.62
C9orf78-206ENST00000492991 PPFIA4O75335 1185 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 PARNO95453 639 aaKnown RBP18.92■□□□□ 0.62
C9orf78-206ENST00000492991 IQCF3P0C7M6 154 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 ACTN1P12814 892 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 HOXD8P13378 290 aaPredicted RBP18.92■□□□□ 0.62
C9orf78-206ENST00000492991 SLC35G1Q2M3R5 365 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 CATIPQ7Z7H3 387 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 CCDC155Q8N6L0 562 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 PPTC7Q8NI37 304 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 CAGE1Q8TC20 777 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 PHOSPHO2Q8TCD6 241 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 KAT2BQ92831 832 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 GAS2L1Q99501 681 aaPredicted RBP18.92■□□□□ 0.62
C9orf78-206ENST00000492991 COL25A1Q9BXS0 654 aaPredicted RBP18.92■□□□□ 0.62
C9orf78-206ENST00000492991 SLC28A3Q9HAS3 691 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 PCDHA11Q9Y5I1 949 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 MRVI1Q9Y6F6 885 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 MYH6P13533 1939 aa18.92■□□□□ 0.62
C9orf78-206ENST00000492991 GCOM1H8Y6P7 765 aaPredicted RBP18.91■□□□□ 0.62
C9orf78-206ENST00000492991 CYTH3O43739 400 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 POLR2MP0CAP2 368 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 RBL2Q08999 1139 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 DHX37Q8IY37 1157 aaKnown RBP18.91■□□□□ 0.62
C9orf78-206ENST00000492991 MB21D2Q8IYB1 491 aaPredicted RBP18.91■□□□□ 0.62
C9orf78-206ENST00000492991 TMTC2Q8N394 836 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 AFAP1L1Q8TED9 768 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 PIGSQ96S52 555 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 KATNAL1Q9BW62 490 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 NOD1Q9Y239 953 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 KIAA1217Q5T5P2 1943 aa18.91■□□□□ 0.62
C9orf78-206ENST00000492991 HAS3O00219 553 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 RGS20O76081 388 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 ATP2A2P16615 1042 aaKnown RBP18.9■□□□□ 0.62
C9orf78-206ENST00000492991 PGM5Q15124 567 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 PTGISQ16647 500 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 TMEM67Q5HYA8 995 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 MYSM1Q5VVJ2 828 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 SENP2Q9HC62 589 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 TAF6LQ9Y6J9 622 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 MYO9BQ13459 2157 aa18.9■□□□□ 0.62
C9orf78-206ENST00000492991 STAM2O75886 525 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 F2P00734 622 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 CCND2P30279 289 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 ANTXR2P58335 489 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 CELF3Q5SZQ8 465 aaKnown RBP18.89■□□□□ 0.61
C9orf78-206ENST00000492991 GDF6Q6KF10 455 aaPredicted RBP18.89■□□□□ 0.61
C9orf78-206ENST00000492991 CHST3Q7LGC8 479 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 HOMER1Q86YM7 354 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 LZTS2Q9BRK4 669 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 SPZ1Q9BXG8 430 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 GTF2IRD1Q9UHL9 959 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 YBX2Q9Y2T7 364 aaKnown RBP18.89■□□□□ 0.61
C9orf78-206ENST00000492991 RBM8AQ9Y5S9 174 aaKnown RBP18.89■□□□□ 0.61
C9orf78-206ENST00000492991 EYSQ5T1H1 3165 aa18.89■□□□□ 0.61
C9orf78-206ENST00000492991 PRUNE2Q8WUY3 3088 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 ZBBXA8MT70 800 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 DDAH1O94760 285 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 BAIAP3O94812 1187 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 MYCLP12524 364 aaPredicted RBP18.88■□□□□ 0.61
C9orf78-206ENST00000492991 HOXA13P31271 388 aaPredicted RBP18.88■□□□□ 0.61
C9orf78-206ENST00000492991 KIF5BP33176 963 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 PSEN2P49810 448 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 DEFB128Q7Z7B8 93 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 SLC9A7Q96T83 725 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 NKX2-4Q9H2Z4 354 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 PRDM12Q9H4Q4 367 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 CHD9Q3L8U1 2897 aa18.88■□□□□ 0.61
C9orf78-206ENST00000492991 GNAQP50148 359 aa18.87■□□□□ 0.61
C9orf78-206ENST00000492991 FRMPD4Q14CM0 1322 aa18.87■□□□□ 0.61
C9orf78-206ENST00000492991 C7orf31Q8N865 590 aa18.87■□□□□ 0.61
C9orf78-206ENST00000492991 SYMPKQ92797 1274 aaKnown RBP18.87■□□□□ 0.61
C9orf78-206ENST00000492991 TMEM87BQ96K49 555 aa18.87■□□□□ 0.61
C9orf78-206ENST00000492991 LY9Q9HBG7 655 aa18.87■□□□□ 0.61
C9orf78-206ENST00000492991 HDAC6Q9UBN7 1215 aa18.87■□□□□ 0.61
C9orf78-206ENST00000492991 SELPP16109 830 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 ICAM3P32942 547 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 MCM5P33992 734 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 LIFRP42702 1097 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
C9orf78-206ENST00000492991 PTK7Q13308 1070 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 MFSD10Q14728 455 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 GNPTABQ3T906 1256 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 XRRA1Q6P2D8 792 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 CASC1Q6TDU7 716 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 ZNF654Q8IZM8 581 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 CTCFLQ8NI51 663 aaPredicted RBP18.86■□□□□ 0.61
C9orf78-206ENST00000492991 SPATA33Q96N06 139 aa18.86■□□□□ 0.61
C9orf78-206ENST00000492991 FTOQ9C0B1 505 aaKnown RBP eCLIP18.86■□□□□ 0.613e-7■■■□□ 17.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms