RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-206	ENST00000492233	STK36	Q9NRP7	1315 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PLCH1	Q4KWH8	1693 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	COL22A1	Q8NFW1	1626 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	UQCRHL	A0A096LP55	91 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	FAM237A	A0A1B0GTK4	181 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	ANO9	A1A5B4	782 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	GOLGA8B	A8MQT2	603 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233		F5H423	210 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	DYNC1I1	O14576	645 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	KIN	O60870	393 aa	Known RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	RFPL1	O75677	317 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CDKL5	O76039	1030 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CAMTA2	O94983	1202 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	UQCRH	P07919	91 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	USP17L7	P0C7H9	530 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	GBP2	P32456	591 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	EIF4A3	P38919	411 aa	Known RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	TSPAN7	P41732	249 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PIK3CA	P42336	1068 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	LIFR	P42702	1097 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CCT5	P48643	541 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	DGKG	P49619	791 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	HAND2	P61296	217 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SSRP1	Q08945	709 aa	Known RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	TRDN	Q13061	729 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	TBX2	Q13207	712 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SAFB	Q15424	915 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PPP2R5E	Q16537	467 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	DACT2	Q5SW24	774 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SLC9C2	Q5TAH2	1124 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SUSD4	Q5VX71	490 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PDXDC2P	Q6P474	469 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	INTS5	Q6P9B9	1019 aa	Known RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CPLX2	Q6PUV4	134 aa	Known RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	POTEG	Q6S5H5	508 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CCDC81	Q6ZN84	652 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CYB5R4	Q7L1T6	521 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CHST3	Q7LGC8	479 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	RNF180	Q86T96	592 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SGMS1	Q86VZ5	419 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PDCD7	Q8N8D1	485 aa	Known RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	JMY	Q8N9B5	988 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	ZNF454	Q8N9F8	522 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	FSIP1	Q8NA03	581 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	ZSWIM2	Q8NEG5	633 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PARD3B	Q8TEW8	1205 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	MRPS27	Q92552	414 aa	Known RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	TBC1D20	Q96BZ9	403 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	TNIP3	Q96KP6	325 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	ZNF830	Q96NB3	372 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	RSRP1	Q9BUV0	290 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	UTP14A	Q9BVJ6	771 aa	Known RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SH3GLB2	Q9NR46	395 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	ACTR10	Q9NZ32	417 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PNMA3	Q9UL41	463 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PYCARD	Q9ULZ3	195 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PCDHA7	Q9UN72	937 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SLIT2	O94813	1529 aa		4.26	□□□□□ -1.73
ATPAF1-206	ENST00000492233	NEDD4	P46934	1319 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SPATA31A1	Q5TZJ5	1347 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	COL16A1	Q07092	1604 aa	Predicted RBP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	GTPBP10	A4D1E9	387 aa	Known RBP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	TRIM64C	A6NLI5	447 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	KIF28P	B7ZC32	967 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CPLX1	O14810	134 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SPTLC2	O15270	562 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	NEMF	O60524	1076 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PPP6R2	O75170	966 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	TNFRSF21	O75509	655 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	IDH1	O75874	414 aa	Known RBP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	NTSR2	O95665	410 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	GNAT2	P19087	354 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PTGS1	P23219	599 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CMA1	P23946	247 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	MAPK9	P45984	424 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	ME1	P48163	572 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	METAP2	P50579	478 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	GTF2A2	P52657	109 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	RCAN1	P53805	252 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SNX16	P57768	344 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	ZNF280A	P59817	542 aa	Predicted RBP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	GUCY1B3	Q02153	619 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	MAP3K12	Q12852	859 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SFSWAP	Q12872	951 aa	Known RBP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PWP1	Q13610	501 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SLC9A5	Q14940	896 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	SLC39A14	Q15043	492 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	STK38	Q15208	465 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	PTPA	Q15257	358 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	NTRK3	Q16288	839 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	CCDC152	Q4G0S7	254 aa		4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	DNAJC21	Q5F1R6	531 aa	Known RBP	4.25	□□□□□ -1.73
ATPAF1-206	ENST00000492233	KRT40	Q6A162	431 aa		4.25	□□□□□ -1.73

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