RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 GNAQP50148 359 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 CCL23P55773 120 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 MRPS5P82675 430 aaKnown RBP10.15□□□□□ -0.78
NUP50-217ENST00000491860 GRM4Q14833 912 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 GNPTABQ3T906 1256 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 CASC1Q6TDU7 716 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 SEPT14Q6ZU15 432 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 STOX1Q6ZVD7 989 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 ADAMTS19Q8TE59 1207 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 AFAP1L1Q8TED9 768 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 LZTS2Q9BRK4 669 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 PBX4Q9BYU1 374 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 RIOX1Q9H6W3 641 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 MAD2L2Q9UI95 211 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 ARIH1Q9Y4X5 557 aaPredicted RBP10.15□□□□□ -0.78
NUP50-217ENST00000491860 MRVI1Q9Y6F6 885 aa10.15□□□□□ -0.78
NUP50-217ENST00000491860 DDX49Q9Y6V7 483 aaKnown RBP10.15□□□□□ -0.78
NUP50-217ENST00000491860 PNMA6FA0A0J9YX94 578 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 E7EWF7 191 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 GCOM1H8Y6P7 765 aaPredicted RBP10.14□□□□□ -0.79
NUP50-217ENST00000491860 DDAH1O94760 285 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 MMP3P08254 477 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 POLR2MP0CAP2 368 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 CALM1P0DP23 149 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 CALM2P0DP24 149 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 CALM3P0DP25 149 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 EIF2AK2P19525 551 aaKnown RBP10.14□□□□□ -0.79
NUP50-217ENST00000491860 CCND2P30279 289 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 ARHGAP1Q07960 439 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 CYB5R4Q7L1T6 521 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 DHX37Q8IY37 1157 aaKnown RBP10.14□□□□□ -0.79
NUP50-217ENST00000491860 PPTC7Q8NI37 304 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 CTCFLQ8NI51 663 aaPredicted RBP10.14□□□□□ -0.79
NUP50-217ENST00000491860 PHOSPHO2Q8TCD6 241 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 MAP4K1Q92918 833 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 FAM122AQ96E09 287 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 SLC9A7Q96T83 725 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 PDCD2LQ9BRP1 358 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 WNT8AQ9H1J5 351 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 CPVLQ9H3G5 476 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 SLC28A3Q9HAS3 691 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 TRMT13Q9NUP7 481 aaKnown RBP10.14□□□□□ -0.79
NUP50-217ENST00000491860 CHD7Q9P2D1 2997 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 DDX41Q9UJV9 622 aaKnown RBP10.14□□□□□ -0.79
NUP50-217ENST00000491860 PCDHA11Q9Y5I1 949 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 NCOR1O75376 2440 aa10.14□□□□□ -0.79
NUP50-217ENST00000491860 TANC1Q9C0D5 1861 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 REV3LO60673 3130 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 ZBBXA8MT70 800 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 KIF28PB7ZC32 967 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 EFCAB14O75071 495 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 PPFIA4O75335 1185 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 BAIAP3O94812 1187 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 ARIH2O95376 493 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 HOXD11P31277 338 aaPredicted RBP10.13□□□□□ -0.79
NUP50-217ENST00000491860 MCM5P33992 734 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 TROAPQ12815 778 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 PTGISQ16647 500 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 LY6KQ17RY6 165 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 TMEM67Q5HYA8 995 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 TMEM63BQ5T3F8 832 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 OTOP2Q7RTS6 562 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 HOMER1Q86YM7 354 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 STAG2Q8N3U4 1231 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 C7orf31Q8N865 590 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 AFG1LQ8WV93 481 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 COPS5Q92905 334 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 CUL5Q93034 780 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 TMEM87BQ96K49 555 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 UHRF1Q96T88 793 aaPredicted RBP10.13□□□□□ -0.79
NUP50-217ENST00000491860 PRDM12Q9H4Q4 367 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 COL20A1Q9P218 1284 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 SEC63Q9UGP8 760 aaKnown RBP10.13□□□□□ -0.79
NUP50-217ENST00000491860 RAPGEFL1Q9UHV5 662 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 MYH7BA7E2Y1 1941 aa10.13□□□□□ -0.79
NUP50-217ENST00000491860 UMODL1Q5DID0 1318 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 IQCF3P0C7M6 154 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 CYP2C9P11712 490 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 MYCLP12524 364 aaPredicted RBP10.12□□□□□ -0.79
NUP50-217ENST00000491860 HOXD8P13378 290 aaPredicted RBP10.12□□□□□ -0.79
NUP50-217ENST00000491860 ATP2A2P16615 1042 aaKnown RBP10.12□□□□□ -0.79
NUP50-217ENST00000491860 PTGS1P23219 599 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 PBX2P40425 430 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 PTH1RQ03431 593 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 RBL2Q08999 1139 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 ADGRE1Q14246 886 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 PGM5Q15124 567 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 RNF20Q5VTR2 975 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 XRRA1Q6P2D8 792 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 VSIG10LQ86VR7 867 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 GIMAP8Q8ND71 665 aaPredicted RBP10.12□□□□□ -0.79
NUP50-217ENST00000491860 TBC1D5Q92609 795 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 RRP36Q96EU6 259 aaKnown RBP10.12□□□□□ -0.79
NUP50-217ENST00000491860 SCLYQ96I15 445 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 SPZ1Q9BXG8 430 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 C1QTNF1Q9BXJ1 281 aa10.12□□□□□ -0.79
NUP50-217ENST00000491860 FTOQ9C0B1 505 aaKnown RBP eCLIP10.12□□□□□ -0.79
NUP50-217ENST00000491860 IL25Q9H293 177 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms