RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 FLRT1Q9NZU1 646 aa13.66□□□□□ -0.22
PTPN7-214ENST00000491584 VPS54Q9P1Q0 977 aa13.66□□□□□ -0.22
PTPN7-214ENST00000491584 ZHX1Q9UKY1 873 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-214ENST00000491584 ZMYND8Q9ULU4 1186 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-214ENST00000491584 PCDHA6Q9UN73 950 aa13.66□□□□□ -0.22
PTPN7-214ENST00000491584 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
PTPN7-214ENST00000491584 PCDHA8Q9Y5H6 950 aa13.66□□□□□ -0.22
PTPN7-214ENST00000491584 ZNF236Q9UL36 1845 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 MEIS2O14770 477 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 OPLAHO14841 1288 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 PPFIA3O75145 1194 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 SNAI1O95863 264 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-214ENST00000491584 TGFB3P10600 412 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 RARBP10826 455 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 PDIA4P13667 645 aaKnown RBP13.65□□□□□ -0.22
PTPN7-214ENST00000491584 TAL1P17542 331 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-214ENST00000491584 PDCP20941 246 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 CCND3P30281 292 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-214ENST00000491584 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
PTPN7-214ENST00000491584 BECN1Q14457 450 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 VSIG10LQ86VR7 867 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 BLIDQ8IZY5 108 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 SLC17A8Q8NDX2 589 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 SCFD2Q8WU76 684 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 CDHR1Q96JP9 859 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 C8orf76Q96K31 380 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 PDCD2LQ9BRP1 358 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 AP5M1Q9H0R1 490 aa13.65□□□□□ -0.22
PTPN7-214ENST00000491584 K7ELQ4 463 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-214ENST00000491584 NKRFO15226 690 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTPN7-214ENST00000491584 MAFGO15525 162 aa13.64□□□□□ -0.23
PTPN7-214ENST00000491584 LARGE1O95461 756 aa13.64□□□□□ -0.23
PTPN7-214ENST00000491584 CTDNEP1O95476 244 aa13.64□□□□□ -0.23
PTPN7-214ENST00000491584 SYN1P17600 705 aa13.64□□□□□ -0.23
PTPN7-214ENST00000491584 MAGEA10P43363 369 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-214ENST00000491584 TNFAIP2Q03169 654 aa13.64□□□□□ -0.23
PTPN7-214ENST00000491584 TTLL4Q14679 1199 aa13.64□□□□□ -0.23
PTPN7-214ENST00000491584 LRIT3Q3SXY7 679 aa13.64□□□□□ -0.23
PTPN7-214ENST00000491584 PCNX4Q63HM2 1172 aa13.64□□□□□ -0.23
PTPN7-214ENST00000491584 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
PTPN7-214ENST00000491584 DDX20Q9UHI6 824 aaKnown RBP13.64□□□□□ -0.23
PTPN7-214ENST00000491584 SPTBN5Q9NRC6 3674 aaKnown RBP13.63□□□□□ -0.23
PTPN7-214ENST00000491584 CCDC194A0A1B0GVG4 234 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 H3BQV1 296 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 ZEB2O60315 1214 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 CYBAP13498 195 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 EDNRBP24530 442 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 PGM5Q15124 567 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 UBE2SQ16763 222 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 LRRC26Q2I0M4 334 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 CCDC144BQ3MJ40 725 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 PRAMEF19Q5SWL8 479 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 JAKMIP3Q5VZ66 844 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 GPR153Q6NV75 609 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 KRT25Q7Z3Z0 450 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
PTPN7-214ENST00000491584 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
PTPN7-214ENST00000491584 WDR11Q9BZH6 1224 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 Q9Y3F1 56 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 CDH23Q9H251 3354 aa13.63□□□□□ -0.23
PTPN7-214ENST00000491584 VCANP13611 3396 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 DLL1O00548 723 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 DUSP11O75319 330 aaKnown RBP13.62□□□□□ -0.23
PTPN7-214ENST00000491584 ZNF865P0CJ78 1059 aaPredicted RBP13.62□□□□□ -0.23
PTPN7-214ENST00000491584 TXNP10599 105 aaKnown RBP13.62□□□□□ -0.23
PTPN7-214ENST00000491584 FDPSP14324 419 aaKnown RBP13.62□□□□□ -0.23
PTPN7-214ENST00000491584 KRT2P35908 639 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 USP11P51784 963 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 SEPT14Q6ZU15 432 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 RNF180Q86T96 592 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 PURBQ96QR8 312 aaKnown RBP13.62□□□□□ -0.23
PTPN7-214ENST00000491584 PHF20Q9BVI0 1012 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 COL20A1Q9P218 1284 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
PTPN7-214ENST00000491584 MRVI1Q9Y6F6 885 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 PRUNE2Q8WUY3 3088 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 PARP14Q460N5 1801 aa13.62□□□□□ -0.23
PTPN7-214ENST00000491584 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
PTPN7-214ENST00000491584 JAK2O60674 1132 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 CUL4AQ13619 759 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 NEDD9Q14511 834 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 NONOQ15233 471 aaKnown RBP eCLIP13.61□□□□□ -0.23
PTPN7-214ENST00000491584 DUSP28Q4G0W2 176 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
PTPN7-214ENST00000491584 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 TDHQ8IZJ6 230 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 TRPV1Q8NER1 839 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 FGD4Q96M96 766 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 ANO3Q9BYT9 981 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 XPNPEP3Q9NQH7 507 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 KCNJ14Q9UNX9 436 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 COL11A1P12107 1806 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-214ENST00000491584 LTBP2Q14767 1821 aa13.61□□□□□ -0.23
PTPN7-214ENST00000491584 BAZ2BQ9UIF8 2168 aaKnown RBP13.61□□□□□ -0.23
PTPN7-214ENST00000491584 KBTBD13C9JR72 458 aa13.6□□□□□ -0.23
PTPN7-214ENST00000491584 FIBPO43427 364 aa13.6□□□□□ -0.23
PTPN7-214ENST00000491584 KPNA6O60684 536 aa13.6□□□□□ -0.23
PTPN7-214ENST00000491584 MMP1P03956 469 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms