RNA–Protein interactions for RNA: ENST00000491439.1

SNAP47-211, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 734 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-211ENST00000491439 CFBP00751 764 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 IQCF3P0C7M6 154 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 HOXD8P13378 290 aaPredicted RBP11.71□□□□□ -0.53
SNAP47-211ENST00000491439 TROAPQ12815 778 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 TRDNQ13061 729 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 ADGRE1Q14246 886 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 SAMD3Q8N6K7 520 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 RUFY2Q8WXA3 655 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 PDCD2LQ9BRP1 358 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.53
SNAP47-211ENST00000491439 PCDHA11Q9Y5I1 949 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 PCDHA1Q9Y5I3 950 aa11.71□□□□□ -0.53
SNAP47-211ENST00000491439 TTC28Q96AY4 2481 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 IFIT3O14879 490 aaKnown RBP11.7□□□□□ -0.54
SNAP47-211ENST00000491439 CYTH3O43739 400 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 F2P00734 622 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 ATP2A2P16615 1042 aaKnown RBP11.7□□□□□ -0.54
SNAP47-211ENST00000491439 RABGGTBP53611 331 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 ANTXR2P58335 489 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 RBL2Q08999 1139 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 GDF6Q6KF10 455 aaPredicted RBP11.7□□□□□ -0.54
SNAP47-211ENST00000491439 DEFB128Q7Z7B8 93 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 VSIG10LQ86VR7 867 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 IL31RAQ8NI17 732 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 PPTC7Q8NI37 304 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 DHX38Q92620 1227 aaKnown RBP11.7□□□□□ -0.54
SNAP47-211ENST00000491439 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 PIGSQ96S52 555 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 GAS2L1Q99501 681 aaPredicted RBP11.7□□□□□ -0.54
SNAP47-211ENST00000491439 SLC28A3Q9HAS3 691 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 MRVI1Q9Y6F6 885 aa11.7□□□□□ -0.54
SNAP47-211ENST00000491439 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 HAS3O00219 553 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 MYOGP15173 224 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 CASTP20810 708 aaKnown RBP11.69□□□□□ -0.54
SNAP47-211ENST00000491439 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
SNAP47-211ENST00000491439 BFSP2Q13515 415 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 LAMC2Q13753 1193 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 GPNMBQ14956 572 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 WTAPQ15007 396 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 PGM5Q15124 567 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 PTGISQ16647 500 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 DGKDQ16760 1214 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 CHST3Q7LGC8 479 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 RALYLQ86SE5 291 aaKnown RBP11.69□□□□□ -0.54
SNAP47-211ENST00000491439 HOMER1Q86YM7 354 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
SNAP47-211ENST00000491439 RETREG2Q8NC44 543 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 NCOA7Q8NI08 942 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 CAGE1Q8TC20 777 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 IGDCC4Q8TDY8 1250 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 AFAP1L1Q8TED9 768 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 GTF2IRD1Q9UHL9 959 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 NOD1Q9Y239 953 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 TRANK1O15050 2925 aa11.69□□□□□ -0.54
SNAP47-211ENST00000491439 FRMPD4Q14CM0 1322 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 ACTN1P12814 892 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 PSEN2P49810 448 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
SNAP47-211ENST00000491439 TRAF1Q13077 416 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 MYSM1Q5VVJ2 828 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 PPP2R2DQ66LE6 453 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 PHOSPHO2Q8TCD6 241 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 SLC9A7Q96T83 725 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 PRDM6Q9NQX0 595 aa11.68□□□□□ -0.54
SNAP47-211ENST00000491439 ERICH2A1L162 156 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 GCOM1H8Y6P7 765 aaPredicted RBP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 BAIAP3O94812 1187 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 POLR2MP0CAP2 368 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 ZNF286BP0CG31 522 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 MYCLP12524 364 aaPredicted RBP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 SELPP16109 830 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 UBA1P22314 1058 aaKnown RBP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 SP2Q02086 613 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 MFSD10Q14728 455 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 SART3Q15020 963 aaKnown RBP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 TRIM71Q2Q1W2 868 aaKnown RBP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 HSDL1Q3SXM5 330 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 CELF3Q5SZQ8 465 aaKnown RBP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 KCNV1Q6PIU1 500 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 LRRC8DQ7L1W4 858 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 DHX37Q8IY37 1157 aaKnown RBP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 GPKOWQ92917 476 aaPredicted RBP eCLIP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 MAP3K14Q99558 947 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 KATNAL1Q9BW62 490 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 LY9Q9HBG7 655 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 HDAC6Q9UBN7 1215 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
SNAP47-211ENST00000491439 TANC1Q9C0D5 1861 aa11.67□□□□□ -0.54
SNAP47-211ENST00000491439 MUC3AQ02505 3323 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 PPFIA4O75335 1185 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 ARHGEF15O94989 841 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 GGPS1O95749 300 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 CXCL10P02778 98 aa11.66□□□□□ -0.54
SNAP47-211ENST00000491439 CA3P07451 260 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms