RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
TTC28-207ENST00000490475 HSD17B4P51659 736 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 SEPT14Q6ZU15 432 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 CYB5R4Q7L1T6 521 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 NCOA7Q8NI08 942 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 AFAP1L1Q8TED9 768 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 TAAR1Q96RJ0 339 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 MTA3Q9BTC8 594 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 VAT1LQ9HCJ6 419 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 TRMT13Q9NUP7 481 aaKnown RBP12.01□□□□□ -0.49
TTC28-207ENST00000490475 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 SLC27A2O14975 620 aa12□□□□□ -0.49
TTC28-207ENST00000490475 EFCAB14O75071 495 aa12□□□□□ -0.49
TTC28-207ENST00000490475 STAM2O75886 525 aa12□□□□□ -0.49
TTC28-207ENST00000490475 MMP3P08254 477 aa12□□□□□ -0.49
TTC28-207ENST00000490475 CYP2C9P11712 490 aa12□□□□□ -0.49
TTC28-207ENST00000490475 SEC23AQ15436 765 aa12□□□□□ -0.49
TTC28-207ENST00000490475 TMEM67Q5HYA8 995 aa12□□□□□ -0.49
TTC28-207ENST00000490475 TMEM63BQ5T3F8 832 aa12□□□□□ -0.49
TTC28-207ENST00000490475 CREB3L3Q68CJ9 461 aa12□□□□□ -0.49
TTC28-207ENST00000490475 CHST3Q7LGC8 479 aa12□□□□□ -0.49
TTC28-207ENST00000490475 PPTC7Q8NI37 304 aa12□□□□□ -0.49
TTC28-207ENST00000490475 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
TTC28-207ENST00000490475 MTMR8Q96EF0 704 aa12□□□□□ -0.49
TTC28-207ENST00000490475 PXMP2Q9NR77 195 aa12□□□□□ -0.49
TTC28-207ENST00000490475 CXXC1Q9P0U4 656 aaPredicted RBP12□□□□□ -0.49
TTC28-207ENST00000490475 MRVI1Q9Y6F6 885 aa12□□□□□ -0.49
TTC28-207ENST00000490475 UMODL1Q5DID0 1318 aa12□□□□□ -0.49
TTC28-207ENST00000490475 TTC28Q96AY4 2481 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 PALM3A6NDB9 673 aaPredicted RBP11.99□□□□□ -0.49
TTC28-207ENST00000490475 GRXCR1A8MXD5 290 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 IFIT3O14879 490 aaKnown RBP11.99□□□□□ -0.49
TTC28-207ENST00000490475 PPFIA4O75335 1185 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 IQCF3P0C7M6 154 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 EIF2AK2P19525 551 aaKnown RBP11.99□□□□□ -0.49
TTC28-207ENST00000490475 PBX2P40425 430 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 RBL2Q08999 1139 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 COL9A3Q14050 684 aaPredicted RBP11.99□□□□□ -0.49
TTC28-207ENST00000490475 WTAPQ15007 396 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 PTGISQ16647 500 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 LY6KQ17RY6 165 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 GNPTABQ3T906 1256 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 TJAP1Q5JTD0 557 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 PPP2R2DQ66LE6 453 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 CATIPQ7Z7H3 387 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
TTC28-207ENST00000490475 TMTC2Q8N394 836 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 C7orf31Q8N865 590 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 AFG1LQ8WV93 481 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 COPS5Q92905 334 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 SCLYQ96I15 445 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 MAP3K14Q99558 947 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
TTC28-207ENST00000490475 CPVLQ9H3G5 476 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 PRDM12Q9H4Q4 367 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 DDX41Q9UJV9 622 aaKnown RBP11.99□□□□□ -0.49
TTC28-207ENST00000490475 TANC1Q9C0D5 1861 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 MYH7BA7E2Y1 1941 aa11.99□□□□□ -0.49
TTC28-207ENST00000490475 CDH23Q9H251 3354 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 NCOR1O75376 2440 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
TTC28-207ENST00000490475 GBF1Q92538 1859 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 PNMA6FA0A0J9YX94 578 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 GCOM1H8Y6P7 765 aaPredicted RBP11.98□□□□□ -0.49
TTC28-207ENST00000490475 ARIH2O95376 493 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 POLR2MP0CAP2 368 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 PTGS1P23219 599 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 CCND2P30279 289 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 KIF5BP33176 963 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 KCNJ6P48051 423 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 ARHGAP1Q07960 439 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 GRM4Q14833 912 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 DEFB128Q7Z7B8 93 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 VSIG10LQ86VR7 867 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 IL27Q8NEV9 243 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 LZTS2Q9BRK4 669 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 PDCD2LQ9BRP1 358 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 ANP32EQ9BTT0 268 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 NKX2-4Q9H2Z4 354 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
TTC28-207ENST00000490475 PRUNE2Q8WUY3 3088 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 GTPBP6O43824 516 aaPredicted RBP11.97□□□□□ -0.49
TTC28-207ENST00000490475 F2P00734 622 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 SELPP16109 830 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 IGFBP4P22692 258 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 SMARCA1P28370 1054 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 GNAQP50148 359 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 ANTXR2P58335 489 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 PTK7Q13308 1070 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 AAK1Q2M2I8 961 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 XRRA1Q6P2D8 792 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 MB21D2Q8IYB1 491 aaPredicted RBP11.97□□□□□ -0.49
TTC28-207ENST00000490475 STAG2Q8N3U4 1231 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 CTCFLQ8NI51 663 aaPredicted RBP11.97□□□□□ -0.49
TTC28-207ENST00000490475 TBC1D5Q92609 795 aa11.97□□□□□ -0.49
TTC28-207ENST00000490475 COL20A1Q9P218 1284 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms