RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ADAMTS3O15072 1205 aa21.41■■□□□ 1.02
PTCD3-217ENST00000488801 EIF3JO75822 258 aaKnown RBP21.41■■□□□ 1.02
PTCD3-217ENST00000488801 CD2BP2O95400 341 aaKnown RBP21.41■■□□□ 1.02
PTCD3-217ENST00000488801 FDPSP14324 419 aaKnown RBP21.41■■□□□ 1.02
PTCD3-217ENST00000488801 MRPS9P82933 396 aaKnown RBP21.41■■□□□ 1.02
PTCD3-217ENST00000488801 TNFAIP2Q03169 654 aa21.41■■□□□ 1.02
PTCD3-217ENST00000488801 LRRC41Q15345 812 aa21.41■■□□□ 1.02
PTCD3-217ENST00000488801 NPY5RQ15761 445 aa21.41■■□□□ 1.02
PTCD3-217ENST00000488801 PCNX4Q63HM2 1172 aa21.41■■□□□ 1.02
PTCD3-217ENST00000488801 CCDC62Q6P9F0 684 aa21.41■■□□□ 1.02
PTCD3-217ENST00000488801 CCDC148Q8NFR7 591 aa21.41■■□□□ 1.02
PTCD3-217ENST00000488801 SCFD2Q8WU76 684 aa21.41■■□□□ 1.02
PTCD3-217ENST00000488801 MYH9P35579 1960 aaKnown RBP21.41■■□□□ 1.02
PTCD3-217ENST00000488801 ARIH2O95376 493 aa21.4■■□□□ 1.02
PTCD3-217ENST00000488801 PTGS1P23219 599 aa21.4■■□□□ 1.02
PTCD3-217ENST00000488801 CCND2P30279 289 aa21.4■■□□□ 1.02
PTCD3-217ENST00000488801 AP3B2Q13367 1082 aa21.4■■□□□ 1.02
PTCD3-217ENST00000488801 XRRA1Q6P2D8 792 aa21.4■■□□□ 1.02
PTCD3-217ENST00000488801 CRYGNQ8WXF5 182 aa21.4■■□□□ 1.02
PTCD3-217ENST00000488801 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-217ENST00000488801 AIFM3Q96NN9 605 aa21.4■■□□□ 1.02
PTCD3-217ENST00000488801 INPP4AQ96PE3 977 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-217ENST00000488801 SH2B1Q9NRF2 756 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-217ENST00000488801 VPS54Q9P1Q0 977 aa21.4■■□□□ 1.02
PTCD3-217ENST00000488801 KAT6AQ92794 2004 aa21.39■■□□□ 1.02
PTCD3-217ENST00000488801 TRIP12Q14669 1992 aaPredicted RBP21.39■■□□□ 1.02
PTCD3-217ENST00000488801 MYADML2A6NDP7 307 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 STAM2O75886 525 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 PGK1P00558 417 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 TLK2Q86UE8 772 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 DAGLBQ8NCG7 672 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 ARRDC4Q8NCT1 418 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 PAWRQ96IZ0 340 aaKnown RBP21.39■■□□□ 1.01
PTCD3-217ENST00000488801 WDR11Q9BZH6 1224 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 PCDHA6Q9UN73 950 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 PCDHA8Q9Y5H6 950 aa21.39■■□□□ 1.01
PTCD3-217ENST00000488801 M0R2N6 131 aa21.38■■□□□ 1.01
PTCD3-217ENST00000488801 NKRFO15226 690 aaKnown RBP eCLIP21.38■■□□□ 1.01
PTCD3-217ENST00000488801 ST18O60284 1047 aa21.38■■□□□ 1.01
PTCD3-217ENST00000488801 FOSP01100 380 aaPredicted RBP21.38■■□□□ 1.01
PTCD3-217ENST00000488801 IRX5P78411 483 aaPredicted RBP21.38■■□□□ 1.01
PTCD3-217ENST00000488801 GJC2Q5T442 439 aaPredicted RBP21.38■■□□□ 1.01
PTCD3-217ENST00000488801 ANO3Q9BYT9 981 aa21.38■■□□□ 1.01
PTCD3-217ENST00000488801 C6orf50Q9HD87 102 aa21.38■■□□□ 1.01
PTCD3-217ENST00000488801 PHF24Q9UPV7 400 aa21.38■■□□□ 1.01
PTCD3-217ENST00000488801 SPDYE3A6NKU9 549 aa21.37■■□□□ 1.01
PTCD3-217ENST00000488801 MYCLP12524 364 aaPredicted RBP21.37■■□□□ 1.01
PTCD3-217ENST00000488801 GNA11P29992 359 aa21.37■■□□□ 1.01
PTCD3-217ENST00000488801 ICAM3P32942 547 aa21.37■■□□□ 1.01
PTCD3-217ENST00000488801 SREBF1P36956 1147 aa21.37■■□□□ 1.01
PTCD3-217ENST00000488801 SEMA3FQ13275 785 aa21.37■■□□□ 1.01
PTCD3-217ENST00000488801 TTLL4Q14679 1199 aa21.37■■□□□ 1.01
PTCD3-217ENST00000488801 NECAB2Q7Z6G3 386 aa21.37■■□□□ 1.01
PTCD3-217ENST00000488801 TSEN34Q9BSV6 310 aaKnown RBP21.37■■□□□ 1.01
PTCD3-217ENST00000488801 ORC3Q9UBD5 711 aaPredicted RBP21.37■■□□□ 1.01
PTCD3-217ENST00000488801 JAK2O60674 1132 aa21.36■■□□□ 1.01
PTCD3-217ENST00000488801 DTNBO60941 627 aa21.36■■□□□ 1.01
PTCD3-217ENST00000488801 SEPT14Q6ZU15 432 aa21.36■■□□□ 1.01
PTCD3-217ENST00000488801 RNF180Q86T96 592 aa21.36■■□□□ 1.01
PTCD3-217ENST00000488801 REXO1Q8N1G1 1221 aaKnown RBP21.36■■□□□ 1.01
PTCD3-217ENST00000488801 LLPHQ9BRT6 129 aaKnown RBP21.36■■□□□ 1.01
PTCD3-217ENST00000488801 PHF20Q9BVI0 1012 aa21.36■■□□□ 1.01
PTCD3-217ENST00000488801 C11orf49Q9H6J7 331 aa21.36■■□□□ 1.01
PTCD3-217ENST00000488801 TMEM260Q9NX78 707 aa21.36■■□□□ 1.01
PTCD3-217ENST00000488801 DDX41Q9UJV9 622 aaKnown RBP21.36■■□□□ 1.01
PTCD3-217ENST00000488801 KBTBD13C9JR72 458 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 MLLT1Q03111 559 aaPredicted RBP21.35■■□□□ 1.01
PTCD3-217ENST00000488801 ARHGAP1Q07960 439 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 SNX17Q15036 470 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 MCTP2Q6DN12 878 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 CCDC83Q8IWF9 413 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 BICD2Q8TD16 824 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 EMID1Q96A84 441 aaPredicted RBP21.35■■□□□ 1.01
PTCD3-217ENST00000488801 PGBD1Q96JS3 809 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 PCDHA4Q9UN74 947 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 UBIAD1Q9Y5Z9 338 aa21.35■■□□□ 1.01
PTCD3-217ENST00000488801 MOXD2PA6NHM9 499 aa21.34■■□□□ 1.01
PTCD3-217ENST00000488801 C6orf222P0C671 652 aaPredicted RBP21.34■■□□□ 1.01
PTCD3-217ENST00000488801 TXNP10599 105 aaKnown RBP21.34■■□□□ 1.01
PTCD3-217ENST00000488801 TGFB3P10600 412 aa21.34■■□□□ 1.01
PTCD3-217ENST00000488801 GALNT17Q6IS24 598 aa21.34■■□□□ 1.01
PTCD3-217ENST00000488801 KCNV1Q6PIU1 500 aa21.34■■□□□ 1.01
PTCD3-217ENST00000488801 COPS5Q92905 334 aa21.34■■□□□ 1.01
PTCD3-217ENST00000488801 EHMT1Q9H9B1 1298 aa21.34■■□□□ 1.01
PTCD3-217ENST00000488801 SPATA31C2B4DYI2 1134 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 CYP3A4P08684 503 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 ITGB5P18084 799 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 UBA1P22314 1058 aaKnown RBP21.33■■□□□ 1.01
PTCD3-217ENST00000488801 MCM2P49736 904 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 FSCN1Q16658 493 aaKnown RBP21.33■■□□□ 1.01
PTCD3-217ENST00000488801 JAKMIP3Q5VZ66 844 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 RASGRP4Q8TDF6 673 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 WASF1Q92558 559 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 GPRASP2Q96D09 838 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 TMX3Q96JJ7 454 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 ZFP91Q96JP5 570 aaPredicted RBP21.33■■□□□ 1.01
PTCD3-217ENST00000488801 SPC25Q9HBM1 224 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 MRVI1Q9Y6F6 885 aa21.33■■□□□ 1.01
PTCD3-217ENST00000488801 MYH15Q9Y2K3 1946 aa21.33■■□□□ 1
PTCD3-217ENST00000488801 A0A1W2PQ45 241 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms