RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 CHMP4BP1P59074 171 aa26.2■■□□□ 1.78
PTPN4-211ENST00000488279 SCLYQ96I15 445 aa26.2■■□□□ 1.78
PTPN4-211ENST00000488279 PDCD2LQ9BRP1 358 aa26.2■■□□□ 1.78
PTPN4-211ENST00000488279 PBX4Q9BYU1 374 aa26.2■■□□□ 1.78
PTPN4-211ENST00000488279 CXXC1Q9P0U4 656 aaPredicted RBP26.2■■□□□ 1.78
PTPN4-211ENST00000488279 MYCLP12524 364 aaPredicted RBP26.19■■□□□ 1.78
PTPN4-211ENST00000488279 FOSL2P15408 326 aa26.19■■□□□ 1.78
PTPN4-211ENST00000488279 LAMC2Q13753 1193 aa26.19■■□□□ 1.78
PTPN4-211ENST00000488279 GRIN2CQ14957 1233 aa26.19■■□□□ 1.78
PTPN4-211ENST00000488279 DGKDQ16760 1214 aa26.19■■□□□ 1.78
PTPN4-211ENST00000488279 CASC1Q6TDU7 716 aa26.19■■□□□ 1.78
PTPN4-211ENST00000488279 MAFAQ8NHW3 353 aaPredicted RBP26.19■■□□□ 1.78
PTPN4-211ENST00000488279 PPP1R13LQ8WUF5 828 aa26.19■■□□□ 1.78
PTPN4-211ENST00000488279 NOD1Q9Y239 953 aa26.19■■□□□ 1.78
PTPN4-211ENST00000488279 PBX2P40425 430 aa26.18■■□□□ 1.78
PTPN4-211ENST00000488279 KCNV1Q6PIU1 500 aa26.18■■□□□ 1.78
PTPN4-211ENST00000488279 VSIG10LQ86VR7 867 aa26.18■■□□□ 1.78
PTPN4-211ENST00000488279 RETREG2Q8NC44 543 aa26.18■■□□□ 1.78
PTPN4-211ENST00000488279 EMID1Q96A84 441 aaPredicted RBP26.18■■□□□ 1.78
PTPN4-211ENST00000488279 MAP3K14Q99558 947 aa26.18■■□□□ 1.78
PTPN4-211ENST00000488279 MTA3Q9BTC8 594 aa26.18■■□□□ 1.78
PTPN4-211ENST00000488279 MSRAQ9UJ68 235 aa26.18■■□□□ 1.78
PTPN4-211ENST00000488279 PFKMP08237 780 aa26.17■■□□□ 1.78
PTPN4-211ENST00000488279 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.17■■□□□ 1.78
PTPN4-211ENST00000488279 DHX37Q8IY37 1157 aaKnown RBP26.17■■□□□ 1.78
PTPN4-211ENST00000488279 TMTC2Q8N394 836 aa26.17■■□□□ 1.78
PTPN4-211ENST00000488279 ESYT1Q9BSJ8 1104 aa26.17■■□□□ 1.78
PTPN4-211ENST00000488279 LSG1Q9H089 658 aaKnown RBP26.17■■□□□ 1.78
PTPN4-211ENST00000488279 LY9Q9HBG7 655 aa26.17■■□□□ 1.78
PTPN4-211ENST00000488279 PITPNM1O00562 1244 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 KIF5BP33176 963 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 MCM5P33992 734 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 BFSP2Q13515 415 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 PGM5Q15124 567 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 RAB30Q15771 203 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 PTGISQ16647 500 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 FCHSD1Q86WN1 690 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 ZNF654Q8IZM8 581 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 CTCFLQ8NI51 663 aaPredicted RBP26.16■■□□□ 1.78
PTPN4-211ENST00000488279 SLC4A7Q9Y6M7 1214 aa26.16■■□□□ 1.78
PTPN4-211ENST00000488279 PRC1O43663 620 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 DDAH1O94760 285 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 RFC2P35250 354 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 NFXL1Q6ZNB6 911 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 DEFB128Q7Z7B8 93 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 SESTD1Q86VW0 696 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 PPTC7Q8NI37 304 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 PIBF1Q8WXW3 757 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 KAT2BQ92831 832 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 VWCEQ96DN2 955 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 SCN10AQ9Y5Y9 1956 aa26.15■■□□□ 1.78
PTPN4-211ENST00000488279 CHD9Q3L8U1 2897 aa26.14■■□□□ 1.78
PTPN4-211ENST00000488279 MYH6P13533 1939 aa26.14■■□□□ 1.78
PTPN4-211ENST00000488279 SLC27A2O14975 620 aa26.14■■□□□ 1.78
PTPN4-211ENST00000488279 RGS20O76081 388 aa26.14■■□□□ 1.78
PTPN4-211ENST00000488279 TGFB3P10600 412 aa26.14■■□□□ 1.78
PTPN4-211ENST00000488279 CCND2P30279 289 aa26.14■■□□□ 1.78
PTPN4-211ENST00000488279 TMEM87BQ96K49 555 aa26.14■■□□□ 1.78
PTPN4-211ENST00000488279 LZTS2Q9BRK4 669 aa26.14■■□□□ 1.78
PTPN4-211ENST00000488279 ZBBXA8MT70 800 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 IQCF3P0C7M6 154 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 SMARCA1P28370 1054 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 GNAQP50148 359 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 IL31RAQ8NI17 732 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 RRP36Q96EU6 259 aaKnown RBP26.13■■□□□ 1.77
PTPN4-211ENST00000488279 MYL10Q9BUA6 226 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 KATNAL1Q9BW62 490 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 SPZ1Q9BXG8 430 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 ANO2Q9NQ90 1003 aa26.13■■□□□ 1.77
PTPN4-211ENST00000488279 CCDC69A6NI79 296 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 PPFIA4O75335 1185 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 ACTN1P12814 892 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 NECTIN1Q15223 517 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 CELF3Q5SZQ8 465 aaKnown RBP26.12■■□□□ 1.77
PTPN4-211ENST00000488279 MYSM1Q5VVJ2 828 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 CREB3L3Q68CJ9 461 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 GDF6Q6KF10 455 aaPredicted RBP26.12■■□□□ 1.77
PTPN4-211ENST00000488279 CCDC155Q8N6L0 562 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 C7orf31Q8N865 590 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 SPATA33Q96N06 139 aa26.12■■□□□ 1.77
PTPN4-211ENST00000488279 SH2B2O14492 632 aaPredicted RBP26.11■■□□□ 1.77
PTPN4-211ENST00000488279 PSEN2P49810 448 aa26.11■■□□□ 1.77
PTPN4-211ENST00000488279 BMP2KLQ5H9B9 411 aa26.11■■□□□ 1.77
PTPN4-211ENST00000488279 CENPQQ7L2Z9 268 aaPredicted RBP26.11■■□□□ 1.77
PTPN4-211ENST00000488279 CAGE1Q8TC20 777 aa26.11■■□□□ 1.77
PTPN4-211ENST00000488279 SLC28A3Q9HAS3 691 aa26.11■■□□□ 1.77
PTPN4-211ENST00000488279 SEC63Q9UGP8 760 aaKnown RBP26.11■■□□□ 1.77
PTPN4-211ENST00000488279 GGPS1O95749 300 aa26.1■■□□□ 1.77
PTPN4-211ENST00000488279 ATP2A2P16615 1042 aaKnown RBP26.1■■□□□ 1.77
PTPN4-211ENST00000488279 LIFRP42702 1097 aa26.1■■□□□ 1.77
PTPN4-211ENST00000488279 SP2Q02086 613 aa26.1■■□□□ 1.77
PTPN4-211ENST00000488279 MFSD10Q14728 455 aa26.1■■□□□ 1.77
PTPN4-211ENST00000488279 ZFP91Q96JP5 570 aaPredicted RBP26.1■■□□□ 1.77
PTPN4-211ENST00000488279 ALG1Q9BT22 464 aa26.1■■□□□ 1.77
PTPN4-211ENST00000488279 FTOQ9C0B1 505 aaKnown RBP eCLIP26.1■■□□□ 1.77
PTPN4-211ENST00000488279 MLXIPQ9HAP2 919 aa26.1■■□□□ 1.77
PTPN4-211ENST00000488279 HDAC6Q9UBN7 1215 aa26.1■■□□□ 1.77
PTPN4-211ENST00000488279 GTF2IRD1Q9UHL9 959 aa26.1■■□□□ 1.77
PTPN4-211ENST00000488279 SORBS3O60504 671 aa26.09■■□□□ 1.77
PTPN4-211ENST00000488279 STAM2O75886 525 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms