RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 RUFY2Q8WXA3 655 aa17.82■□□□□ 0.44
TRIM50-203ENST00000488217 KAT2BQ92831 832 aa17.82■□□□□ 0.44
TRIM50-203ENST00000488217 FTOQ9C0B1 505 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM50-203ENST00000488217 MMP3P08254 477 aa17.81■□□□□ 0.44
TRIM50-203ENST00000488217 GSPT1P15170 499 aaKnown RBP17.81■□□□□ 0.44
TRIM50-203ENST00000488217 GHRHRQ02643 423 aa17.81■□□□□ 0.44
TRIM50-203ENST00000488217 TRAF1Q13077 416 aa17.81■□□□□ 0.44
TRIM50-203ENST00000488217 CCDC85BQ15834 202 aaPredicted RBP17.81■□□□□ 0.44
TRIM50-203ENST00000488217 TMEM67Q5HYA8 995 aa17.81■□□□□ 0.44
TRIM50-203ENST00000488217 SESTD1Q86VW0 696 aa17.81■□□□□ 0.44
TRIM50-203ENST00000488217 SAMD3Q8N6K7 520 aa17.81■□□□□ 0.44
TRIM50-203ENST00000488217 EMID1Q96A84 441 aaPredicted RBP17.81■□□□□ 0.44
TRIM50-203ENST00000488217 OPLAHO14841 1288 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 IFIT3O14879 490 aaKnown RBP17.8■□□□□ 0.44
TRIM50-203ENST00000488217 PPP1R11O60927 126 aaPredicted RBP17.8■□□□□ 0.44
TRIM50-203ENST00000488217 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 CYP21A2P08686 494 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 MYCLP12524 364 aaPredicted RBP17.8■□□□□ 0.44
TRIM50-203ENST00000488217 CHMLP26374 656 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 PTH1RQ03431 593 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 TJAP1Q5JTD0 557 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 PPP2R2DQ66LE6 453 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 GDF6Q6KF10 455 aaPredicted RBP17.8■□□□□ 0.44
TRIM50-203ENST00000488217 KCNV1Q6PIU1 500 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 VSIG10LQ86VR7 867 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 DHX37Q8IY37 1157 aaKnown RBP17.8■□□□□ 0.44
TRIM50-203ENST00000488217 ATXN2LQ8WWM7 1075 aaKnown RBP17.8■□□□□ 0.44
TRIM50-203ENST00000488217 RIOX1Q9H6W3 641 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 PRDM6Q9NQX0 595 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 MRVI1Q9Y6F6 885 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 CUL9Q8IWT3 2517 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 CHD9Q3L8U1 2897 aa17.8■□□□□ 0.44
TRIM50-203ENST00000488217 SPTBN5Q9NRC6 3674 aaKnown RBP17.79■□□□□ 0.44
TRIM50-203ENST00000488217 ERICH2A1L162 156 aa17.79■□□□□ 0.44
TRIM50-203ENST00000488217 C7orf31Q8N865 590 aa17.79■□□□□ 0.44
TRIM50-203ENST00000488217 CAGE1Q8TC20 777 aa17.79■□□□□ 0.44
TRIM50-203ENST00000488217 CTAGE1Q96RT6 745 aa17.79■□□□□ 0.44
TRIM50-203ENST00000488217 PIGSQ96S52 555 aa17.79■□□□□ 0.44
TRIM50-203ENST00000488217 KIF28PB7ZC32 967 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 GCOM1H8Y6P7 765 aaPredicted RBP17.78■□□□□ 0.44
TRIM50-203ENST00000488217 POLR2MP0CAP2 368 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 TGFB3P10600 412 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 HOXA13P31271 388 aaPredicted RBP17.78■□□□□ 0.44
TRIM50-203ENST00000488217 GRM4Q14833 912 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 MYSM1Q5VVJ2 828 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 CCDC155Q8N6L0 562 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 PPTC7Q8NI37 304 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 AFAP1L1Q8TED9 768 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 PDCD2LQ9BRP1 358 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 HDAC6Q9UBN7 1215 aa17.78■□□□□ 0.44
TRIM50-203ENST00000488217 PNMA6FA0A0J9YX94 578 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 E7EWF7 191 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 RGS20O76081 388 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 SELPP16109 830 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 PSEN2P49810 448 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 TROAPQ12815 778 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 GPNMBQ14956 572 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 SLC35G1Q2M3R5 365 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 CELF3Q5SZQ8 465 aaKnown RBP17.77■□□□□ 0.44
TRIM50-203ENST00000488217 HOMER1Q86YM7 354 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 NCOA7Q8NI08 942 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 ASB2Q96Q27 587 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 SLC9A7Q96T83 725 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 ALG1Q9BT22 464 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 KATNAL1Q9BW62 490 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 SENP2Q9HC62 589 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 GTF2IRD1Q9UHL9 959 aa17.77■□□□□ 0.44
TRIM50-203ENST00000488217 HAS3O00219 553 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 CYTH3O43739 400 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 BAIAP3O94812 1187 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 PARNO95453 639 aaKnown RBP17.76■□□□□ 0.43
TRIM50-203ENST00000488217 CA3P07451 260 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 MFSD10Q14728 455 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 WTAPQ15007 396 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 SART3Q15020 963 aaKnown RBP17.76■□□□□ 0.43
TRIM50-203ENST00000488217 PGM5Q15124 567 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 KIAA0753Q2KHM9 967 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 RALYLQ86SE5 291 aaKnown RBP17.76■□□□□ 0.43
TRIM50-203ENST00000488217 HERC6Q8IVU3 1022 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 IGDCC4Q8TDY8 1250 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 MAP4K1Q92918 833 aa17.76■□□□□ 0.43
TRIM50-203ENST00000488217 SGSM2O43147 1006 aa17.75■□□□□ 0.43
TRIM50-203ENST00000488217 CKBP12277 381 aa17.75■□□□□ 0.43
TRIM50-203ENST00000488217 POU3F3P20264 500 aaPredicted RBP17.75■□□□□ 0.43
TRIM50-203ENST00000488217 MRPS5P82675 430 aaKnown RBP17.75■□□□□ 0.43
TRIM50-203ENST00000488217 SP2Q02086 613 aa17.75■□□□□ 0.43
TRIM50-203ENST00000488217 CATIPQ7Z7H3 387 aa17.75■□□□□ 0.43
TRIM50-203ENST00000488217 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
TRIM50-203ENST00000488217 SPATA33Q96N06 139 aa17.75■□□□□ 0.43
TRIM50-203ENST00000488217 TSPYL2Q9H2G4 693 aaPredicted RBP17.75■□□□□ 0.43
TRIM50-203ENST00000488217 MLXIPQ9HAP2 919 aa17.75■□□□□ 0.43
TRIM50-203ENST00000488217 TAF6LQ9Y6J9 622 aa17.75■□□□□ 0.43
TRIM50-203ENST00000488217 RFXAPO00287 272 aa17.74■□□□□ 0.43
TRIM50-203ENST00000488217 F2P00734 622 aa17.74■□□□□ 0.43
TRIM50-203ENST00000488217 HOXD8P13378 290 aaPredicted RBP17.74■□□□□ 0.43
TRIM50-203ENST00000488217 CCND2P30279 289 aa17.74■□□□□ 0.43
TRIM50-203ENST00000488217 PTK7Q13308 1070 aa17.74■□□□□ 0.43
TRIM50-203ENST00000488217 HSDL1Q3SXM5 330 aa17.74■□□□□ 0.43
TRIM50-203ENST00000488217 LRRC8DQ7L1W4 858 aa17.74■□□□□ 0.43
TRIM50-203ENST00000488217 DHX38Q92620 1227 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms