RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 EARS2Q5JPH6 523 aaKnown RBP19.65■□□□□ 0.74
SHROOM1-205ENST00000488072 SAMD3Q8N6K7 520 aa19.65■□□□□ 0.74
SHROOM1-205ENST00000488072 IWS1Q96ST2 819 aa19.65■□□□□ 0.74
SHROOM1-205ENST00000488072 WDR11Q9BZH6 1224 aa19.65■□□□□ 0.74
SHROOM1-205ENST00000488072 C6orf50Q9HD87 102 aa19.65■□□□□ 0.74
SHROOM1-205ENST00000488072 VTA1Q9NP79 307 aa19.65■□□□□ 0.74
SHROOM1-205ENST00000488072 NRBP1Q9UHY1 535 aa19.65■□□□□ 0.74
SHROOM1-205ENST00000488072 OGDHLQ9ULD0 1010 aa19.65■□□□□ 0.74
SHROOM1-205ENST00000488072 RBM47A0AV96 593 aaKnown RBP19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 SPDYE3A6NKU9 549 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 CTAGE5O15320 804 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 CCND2P30279 289 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 SP2Q02086 613 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 PHF20Q9BVI0 1012 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 MAF1Q9H063 256 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 SH3GLB2Q9NR46 395 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 PKD2L1Q9P0L9 805 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 PCDHA4Q9UN74 947 aa19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 GNEQ9Y223 722 aaKnown RBP19.64■□□□□ 0.73
SHROOM1-205ENST00000488072 SYNRGQ9UMZ2 1314 aa19.63■□□□□ 0.73
SHROOM1-205ENST00000488072 M0R2N6 131 aa19.63■□□□□ 0.73
SHROOM1-205ENST00000488072 DYNC1LI2O43237 492 aaPredicted RBP19.63■□□□□ 0.73
SHROOM1-205ENST00000488072 ADAMTS4O75173 837 aa19.63■□□□□ 0.73
SHROOM1-205ENST00000488072 KRT40Q6A162 431 aa19.63■□□□□ 0.73
SHROOM1-205ENST00000488072 CCDC62Q6P9F0 684 aa19.63■□□□□ 0.73
SHROOM1-205ENST00000488072 BLIDQ8IZY5 108 aa19.63■□□□□ 0.73
SHROOM1-205ENST00000488072 XPNPEP3Q9NQH7 507 aa19.63■□□□□ 0.73
SHROOM1-205ENST00000488072 EIF3JO75822 258 aaKnown RBP19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 TXNP10599 105 aaKnown RBP19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 RARBP10826 455 aa19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 ITGB5P18084 799 aa19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 NR5A1Q13285 461 aa19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 LRRC41Q15345 812 aa19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 REXO1Q8N1G1 1221 aaKnown RBP19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 CCDC148Q8NFR7 591 aa19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 PPP1R13LQ8WUF5 828 aa19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 PAWRQ96IZ0 340 aaKnown RBP19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 LLPHQ9BRT6 129 aaKnown RBP19.62■□□□□ 0.73
SHROOM1-205ENST00000488072 LOC102724159A0A0B4J2E5 919 aa19.61■□□□□ 0.73
SHROOM1-205ENST00000488072 GNA11P29992 359 aa19.61■□□□□ 0.73
SHROOM1-205ENST00000488072 PWP2Q15269 919 aaKnown RBP19.61■□□□□ 0.73
SHROOM1-205ENST00000488072 PCNX4Q63HM2 1172 aa19.61■□□□□ 0.73
SHROOM1-205ENST00000488072 IQSEC1Q6DN90 963 aa19.61■□□□□ 0.73
SHROOM1-205ENST00000488072 CCDC12Q8WUD4 166 aaPredicted RBP19.61■□□□□ 0.73
SHROOM1-205ENST00000488072 FERMT2Q96AC1 680 aa19.61■□□□□ 0.73
SHROOM1-205ENST00000488072 DDX41Q9UJV9 622 aaKnown RBP19.61■□□□□ 0.73
SHROOM1-205ENST00000488072 RBAK-RBAKDNI3L0D1 243 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 ATP9AO75110 1047 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 DUSP11O75319 330 aaKnown RBP19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 FARP2O94887 1054 aaPredicted RBP19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 ARP10275 920 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 GJB2P29033 226 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 SREBF1P36956 1147 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 ARHGAP4P98171 946 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 DUSP28Q4G0W2 176 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 UBE2Q1Q7Z7E8 422 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 TLK2Q86UE8 772 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 CRYGNQ8WXF5 182 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 UBIAD1Q9Y5Z9 338 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 MRVI1Q9Y6F6 885 aa19.6■□□□□ 0.73
SHROOM1-205ENST00000488072 BTBD18B2RXH4 712 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 FAM86B1E9PN63 330 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 WNT7AO00755 349 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 FAM86B2P0C5J1 330 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 C6orf222P0C671 652 aaPredicted RBP19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 MCM2P49736 904 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 AP3B2Q13367 1082 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 CUL4AQ13619 759 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 CCSAPQ6IQ19 270 aaPredicted RBP19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 DAGLBQ8NCG7 672 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 KLHDC9Q8NEP7 349 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 OR6J1Q8NGC5 347 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 SCFD2Q8WU76 684 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 TNFRSF25Q93038 417 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 GJA10Q969M2 543 aa19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 INPP4AQ96PE3 977 aaPredicted RBP19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 MPHOSPH6Q99547 160 aaKnown RBP19.59■□□□□ 0.73
SHROOM1-205ENST00000488072 B4DLN1 442 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 SPATA31C2B4DYI2 1134 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 KIF28PB7ZC32 967 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 FOSP01100 380 aaPredicted RBP19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 UBA1P22314 1058 aaKnown RBP19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 GJA9P57773 515 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 ARHGAP1Q07960 439 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 TTLL4Q14679 1199 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 KCNA10Q16322 511 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 INF2Q27J81 1249 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 TBCKQ8TEA7 893 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 WASF1Q92558 559 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 C8orf76Q96K31 380 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 UPF3AQ9H1J1 476 aaKnown RBP19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 FRMPD3Q5JV73 1810 aa19.58■□□□□ 0.72
SHROOM1-205ENST00000488072 K7ELQ4 463 aaPredicted RBP19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 MSCO60682 206 aa19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 MMP1P03956 469 aa19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 PIK3AP1Q6ZUJ8 805 aa19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 DIS3L2Q8IYB7 885 aaKnown RBP19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 FAM184AQ8NB25 1140 aa19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 SPRYD3Q8NCJ5 442 aa19.57■□□□□ 0.72
SHROOM1-205ENST00000488072 BICD2Q8TD16 824 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms