RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 PCDHA2Q9Y5H9 948 aa6.39□□□□□ -1.39
LINC00888-204ENST00000487386 TRBV23-1A0A0A0MS06 115 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 BLACEA4D250 179 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 ZBTB7AO95365 584 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 C6orf222P0C671 652 aaPredicted RBP6.38□□□□□ -1.39
LINC00888-204ENST00000487386 IGFBP6P24592 240 aaPredicted RBP6.38□□□□□ -1.39
LINC00888-204ENST00000487386 SLC6A11P48066 632 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 ZNF200P98182 395 aaPredicted RBP6.38□□□□□ -1.39
LINC00888-204ENST00000487386 KCNA10Q16322 511 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 ZC3H12BQ5HYM0 836 aaKnown RBP6.38□□□□□ -1.39
LINC00888-204ENST00000487386 KCNT2Q6UVM3 1135 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 LILRB2Q8N423 598 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 KISS1RQ969F8 398 aaPredicted RBP6.38□□□□□ -1.39
LINC00888-204ENST00000487386 TRMT2BQ96GJ1 504 aaKnown RBP6.38□□□□□ -1.39
LINC00888-204ENST00000487386 TMEM169Q96HH4 297 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 ZFYVE21Q9BQ24 234 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 NUDT5Q9UKK9 219 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 SIT1Q9Y3P8 196 aa6.38□□□□□ -1.39
LINC00888-204ENST00000487386 ASXL2Q76L83 1435 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 NPIPB6E9PJ23 425 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 SGSM2O43147 1006 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 GPR85P60893 370 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
LINC00888-204ENST00000487386 NFE2L2Q16236 605 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 LBX2Q6XYB7 198 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 C1QL4Q86Z23 238 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 DCP2Q8IU60 420 aaKnown RBP6.37□□□□□ -1.39
LINC00888-204ENST00000487386 TMEFF1Q8IYR6 380 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 SIGLEC10Q96LC7 697 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 DHRS4Q9BTZ2 278 aa6.37□□□□□ -1.39
LINC00888-204ENST00000487386 EPB41L4AQ9HCS5 686 aaPredicted RBP6.37□□□□□ -1.39
LINC00888-204ENST00000487386 DBR1Q9UK59 544 aaKnown RBP6.37□□□□□ -1.39
LINC00888-204ENST00000487386 ASGR2P07307 311 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 CFPP27918 469 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 NCKAP1LP55160 1127 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 LINC00310P59036 64 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 JAG1P78504 1218 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 BMS1Q14692 1282 aaKnown RBP6.36□□□□□ -1.39
LINC00888-204ENST00000487386 SSPNQ14714 243 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 CCDC144BQ3MJ40 725 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.36□□□□□ -1.39
LINC00888-204ENST00000487386 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
LINC00888-204ENST00000487386 SEC14L1Q92503 715 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 CDC6Q99741 560 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 RNF38Q9H0F5 515 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 CLDND1Q9NY35 253 aa6.36□□□□□ -1.39
LINC00888-204ENST00000487386 MRPS23Q9Y3D9 190 aaKnown RBP6.36□□□□□ -1.39
LINC00888-204ENST00000487386 ATF2P15336 505 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 TARBP2Q15633 366 aaKnown RBP6.35□□□□□ -1.39
LINC00888-204ENST00000487386 C2orf27AQ580R0 203 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 DPH6Q7L8W6 267 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 IFNL3Q8IZI9 196 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC00888-204ENST00000487386 CPA5Q8WXQ8 436 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 PTPRN2Q92932 1015 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 CHAMP1Q96JM3 812 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 BCAS3Q9H6U6 928 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 ZSWIM4Q9H7M6 989 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 PPARGC1AQ9UBK2 798 aaKnown RBP6.35□□□□□ -1.39
LINC00888-204ENST00000487386 COA3Q9Y2R0 106 aaPredicted RBP6.35□□□□□ -1.39
LINC00888-204ENST00000487386 KCTD3Q9Y597 815 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 IRAK3Q9Y616 596 aa6.35□□□□□ -1.39
LINC00888-204ENST00000487386 BUB1BO60566 1050 aaPredicted RBP6.34□□□□□ -1.39
LINC00888-204ENST00000487386 TADA3O75528 432 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 NCAM1P13591 858 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 PMLP29590 882 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 KIZQ2M2Z5 673 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 EMC4Q5J8M3 183 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 MAMDC2Q7Z304 686 aaPredicted RBP6.34□□□□□ -1.39
LINC00888-204ENST00000487386 ALG3Q92685 438 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 IPO9Q96P70 1041 aaKnown RBP6.34□□□□□ -1.39
LINC00888-204ENST00000487386 AP5M1Q9H0R1 490 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 EPB41L1Q9H4G0 881 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 PIF1Q9H611 641 aa6.34□□□□□ -1.39
LINC00888-204ENST00000487386 CNOT6Q9ULM6 557 aaKnown RBP6.34□□□□□ -1.39
LINC00888-204ENST00000487386 CCDC163A0A0D9SF12 145 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 PFKLP17858 780 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 PI3P19957 117 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 GABREP78334 506 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 AMIGO3Q86WK7 504 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 FAM129CQ86XR2 697 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 MIB1Q86YT6 1006 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 LRRC56Q8IYG6 542 aaPredicted RBP6.33□□□□□ -1.4
LINC00888-204ENST00000487386 ZSWIM2Q8NEG5 633 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 PANK1Q8TE04 598 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 DACT3Q96B18 629 aaPredicted RBP6.33□□□□□ -1.4
LINC00888-204ENST00000487386 MRFAP1L1Q96HT8 127 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 JAM3Q9BX67 310 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 PALD1Q9ULE6 856 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 ZNF652Q9Y2D9 606 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 TRAF6Q9Y4K3 522 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 PTCH2Q9Y6C5 1203 aa6.33□□□□□ -1.4
LINC00888-204ENST00000487386 HGSO14964 777 aaPredicted RBP6.32□□□□□ -1.4
LINC00888-204ENST00000487386 GRK2P25098 689 aa6.32□□□□□ -1.4
LINC00888-204ENST00000487386 GRK3P35626 688 aa6.32□□□□□ -1.4
LINC00888-204ENST00000487386 FOXO4P98177 505 aa6.32□□□□□ -1.4
LINC00888-204ENST00000487386 CHRNA2Q15822 529 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms