RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 TRAF1Q13077 416 aa26.03■■□□□ 1.76
SREBF1-214ENST00000486311 HOMER1Q86YM7 354 aa26.03■■□□□ 1.76
SREBF1-214ENST00000486311 EMID1Q96A84 441 aaPredicted RBP26.03■■□□□ 1.76
SREBF1-214ENST00000486311 PIGSQ96S52 555 aa26.03■■□□□ 1.76
SREBF1-214ENST00000486311 PDCD2LQ9BRP1 358 aa26.03■■□□□ 1.76
SREBF1-214ENST00000486311 PRUNE2Q8WUY3 3088 aa26.02■■□□□ 1.76
SREBF1-214ENST00000486311 CASTP20810 708 aaKnown RBP26.02■■□□□ 1.76
SREBF1-214ENST00000486311 RFC2P35250 354 aa26.02■■□□□ 1.76
SREBF1-214ENST00000486311 CHST3Q7LGC8 479 aa26.02■■□□□ 1.76
SREBF1-214ENST00000486311 SESTD1Q86VW0 696 aa26.02■■□□□ 1.76
SREBF1-214ENST00000486311 KAT2BQ92831 832 aa26.02■■□□□ 1.76
SREBF1-214ENST00000486311 MRVI1Q9Y6F6 885 aa26.02■■□□□ 1.76
SREBF1-214ENST00000486311 SLC4A7Q9Y6M7 1214 aa26.02■■□□□ 1.76
SREBF1-214ENST00000486311 CHD9Q3L8U1 2897 aa26.01■■□□□ 1.76
SREBF1-214ENST00000486311 CYTH3O43739 400 aa26.01■■□□□ 1.75
SREBF1-214ENST00000486311 ANTXR2P58335 489 aa26.01■■□□□ 1.75
SREBF1-214ENST00000486311 TMEM67Q5HYA8 995 aa26.01■■□□□ 1.75
SREBF1-214ENST00000486311 MB21D2Q8IYB1 491 aaPredicted RBP26.01■■□□□ 1.75
SREBF1-214ENST00000486311 RETREG2Q8NC44 543 aa26.01■■□□□ 1.75
SREBF1-214ENST00000486311 IGDCC4Q8TDY8 1250 aa26.01■■□□□ 1.75
SREBF1-214ENST00000486311 HOXA13P31271 388 aaPredicted RBP26■■□□□ 1.75
SREBF1-214ENST00000486311 CHMP4BP1P59074 171 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 BFSP2Q13515 415 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 LAMC2Q13753 1193 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 DGKDQ16760 1214 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 DEFB128Q7Z7B8 93 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 CATIPQ7Z7H3 387 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 VSIG10LQ86VR7 867 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 NKX2-4Q9H2Z4 354 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 NOD1Q9Y239 953 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 YBX2Q9Y2T7 364 aaKnown RBP26■■□□□ 1.75
SREBF1-214ENST00000486311 RBM8AQ9Y5S9 174 aaKnown RBP26■■□□□ 1.75
SREBF1-214ENST00000486311 VCANP13611 3396 aa26■■□□□ 1.75
SREBF1-214ENST00000486311 PNMA6FA0A0J9YX94 578 aa25.99■■□□□ 1.75
SREBF1-214ENST00000486311 ZBBXA8MT70 800 aa25.99■■□□□ 1.75
SREBF1-214ENST00000486311 GCOM1H8Y6P7 765 aaPredicted RBP25.99■■□□□ 1.75
SREBF1-214ENST00000486311 RGS20O76081 388 aa25.99■■□□□ 1.75
SREBF1-214ENST00000486311 IQCF3P0C7M6 154 aa25.99■■□□□ 1.75
SREBF1-214ENST00000486311 POLR2MP0CAP2 368 aa25.99■■□□□ 1.75
SREBF1-214ENST00000486311 PTGISQ16647 500 aa25.99■■□□□ 1.75
SREBF1-214ENST00000486311 PPTC7Q8NI37 304 aa25.99■■□□□ 1.75
SREBF1-214ENST00000486311 PRDM12Q9H4Q4 367 aa25.99■■□□□ 1.75
SREBF1-214ENST00000486311 MYCLP12524 364 aaPredicted RBP25.98■■□□□ 1.75
SREBF1-214ENST00000486311 PGM5Q15124 567 aa25.98■■□□□ 1.75
SREBF1-214ENST00000486311 KCNV1Q6PIU1 500 aa25.98■■□□□ 1.75
SREBF1-214ENST00000486311 CTAGE1Q96RT6 745 aa25.98■■□□□ 1.75
SREBF1-214ENST00000486311 GAS2L1Q99501 681 aaPredicted RBP25.98■■□□□ 1.75
SREBF1-214ENST00000486311 SLC28A3Q9HAS3 691 aa25.98■■□□□ 1.75
SREBF1-214ENST00000486311 ACTN1P12814 892 aa25.97■■□□□ 1.75
SREBF1-214ENST00000486311 ATP2A2P16615 1042 aaKnown RBP25.97■■□□□ 1.75
SREBF1-214ENST00000486311 GDF6Q6KF10 455 aaPredicted RBP25.97■■□□□ 1.75
SREBF1-214ENST00000486311 DHX37Q8IY37 1157 aaKnown RBP25.97■■□□□ 1.75
SREBF1-214ENST00000486311 IL31RAQ8NI17 732 aa25.97■■□□□ 1.75
SREBF1-214ENST00000486311 CAGE1Q8TC20 777 aa25.97■■□□□ 1.75
SREBF1-214ENST00000486311 MAP3K14Q99558 947 aa25.97■■□□□ 1.75
SREBF1-214ENST00000486311 PCDHA11Q9Y5I1 949 aa25.97■■□□□ 1.75
SREBF1-214ENST00000486311 HOXD8P13378 290 aaPredicted RBP25.96■■□□□ 1.75
SREBF1-214ENST00000486311 RABGGTBP53611 331 aa25.96■■□□□ 1.75
SREBF1-214ENST00000486311 CCDC155Q8N6L0 562 aa25.96■■□□□ 1.75
SREBF1-214ENST00000486311 USP38Q8NB14 1042 aa25.96■■□□□ 1.75
SREBF1-214ENST00000486311 MTA3Q9BTC8 594 aa25.96■■□□□ 1.75
SREBF1-214ENST00000486311 KATNAL1Q9BW62 490 aa25.96■■□□□ 1.75
SREBF1-214ENST00000486311 F2P00734 622 aa25.95■■□□□ 1.74
SREBF1-214ENST00000486311 CCND2P30279 289 aa25.95■■□□□ 1.74
SREBF1-214ENST00000486311 PSEN2P49810 448 aa25.95■■□□□ 1.74
SREBF1-214ENST00000486311 CELF3Q5SZQ8 465 aaKnown RBP25.95■■□□□ 1.74
SREBF1-214ENST00000486311 MYSM1Q5VVJ2 828 aa25.95■■□□□ 1.74
SREBF1-214ENST00000486311 FCHSD1Q86WN1 690 aa25.95■■□□□ 1.74
SREBF1-214ENST00000486311 AFAP1L1Q8TED9 768 aa25.95■■□□□ 1.74
SREBF1-214ENST00000486311 LSG1Q9H089 658 aaKnown RBP25.95■■□□□ 1.74
SREBF1-214ENST00000486311 LY9Q9HBG7 655 aa25.95■■□□□ 1.74
SREBF1-214ENST00000486311 GTF2IRD1Q9UHL9 959 aa25.95■■□□□ 1.74
SREBF1-214ENST00000486311 HAS3O00219 553 aa25.94■■□□□ 1.74
SREBF1-214ENST00000486311 DDAH1O94760 285 aa25.94■■□□□ 1.74
SREBF1-214ENST00000486311 TGFB3P10600 412 aa25.94■■□□□ 1.74
SREBF1-214ENST00000486311 MFSD10Q14728 455 aa25.94■■□□□ 1.74
SREBF1-214ENST00000486311 ZNF654Q8IZM8 581 aa25.94■■□□□ 1.74
SREBF1-214ENST00000486311 C7orf31Q8N865 590 aa25.94■■□□□ 1.74
SREBF1-214ENST00000486311 HDAC6Q9UBN7 1215 aa25.94■■□□□ 1.74
SREBF1-214ENST00000486311 PPFIA4O75335 1185 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 ZNF286BP0CG31 522 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 MYOGP15173 224 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 RBL2Q08999 1139 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 ADGRE1Q14246 886 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 KIAA0753Q2KHM9 967 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 PHOSPHO2Q8TCD6 241 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 DHX38Q92620 1227 aaKnown RBP25.93■■□□□ 1.74
SREBF1-214ENST00000486311 SPATA33Q96N06 139 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 ALG1Q9BT22 464 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 SPZ1Q9BXG8 430 aa25.93■■□□□ 1.74
SREBF1-214ENST00000486311 FTOQ9C0B1 505 aaKnown RBP eCLIP25.93■■□□□ 1.74
SREBF1-214ENST00000486311 FRMPD4Q14CM0 1322 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 PRC1O43663 620 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 GGPS1O95749 300 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 UBA1P22314 1058 aaKnown RBP25.92■■□□□ 1.74
SREBF1-214ENST00000486311 SMARCA1P28370 1054 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 KIF5BP33176 963 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 SP2Q02086 613 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 HSDL1Q3SXM5 330 aa25.92■■□□□ 1.74
SREBF1-214ENST00000486311 PPP2R2DQ66LE6 453 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms