RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 ARHGAP1Q07960 439 aa18.39■□□□□ 0.53
SIK3-211ENST00000485363 NECTIN1Q15223 517 aa18.39■□□□□ 0.53
SIK3-211ENST00000485363 NFXL1Q6ZNB6 911 aa18.39■□□□□ 0.53
SIK3-211ENST00000485363 DDX41Q9UJV9 622 aaKnown RBP18.39■□□□□ 0.53
SIK3-211ENST00000485363 MRVI1Q9Y6F6 885 aa18.39■□□□□ 0.53
SIK3-211ENST00000485363 MYH7BA7E2Y1 1941 aa18.39■□□□□ 0.53
SIK3-211ENST00000485363 CCDC69A6NI79 296 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 SH2B2O14492 632 aaPredicted RBP18.38■□□□□ 0.53
SIK3-211ENST00000485363 FGBP02675 491 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 CYP2C9P11712 490 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 SMARCA1P28370 1054 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 PGM5Q15124 567 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 RASIP1Q5U651 963 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 KCNV1Q6PIU1 500 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 VSIG10LQ86VR7 867 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 RPUSD2Q8IZ73 545 aaKnown RBP18.38■□□□□ 0.53
SIK3-211ENST00000485363 PIBF1Q8WXW3 757 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 EMID1Q96A84 441 aaPredicted RBP18.38■□□□□ 0.53
SIK3-211ENST00000485363 RRP36Q96EU6 259 aaKnown RBP18.38■□□□□ 0.53
SIK3-211ENST00000485363 LZTS2Q9BRK4 669 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 MYL10Q9BUA6 226 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 SPZ1Q9BXG8 430 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 WNT8AQ9H1J5 351 aa18.38■□□□□ 0.53
SIK3-211ENST00000485363 MTIF3Q9H2K0 278 aaKnown RBP18.38■□□□□ 0.53
SIK3-211ENST00000485363 TTYH1Q9H313 450 aaPredicted RBP18.38■□□□□ 0.53
SIK3-211ENST00000485363 CALM1P0DP23 149 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 CALM2P0DP24 149 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 CALM3P0DP25 149 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 CASTP20810 708 aaKnown RBP18.37■□□□□ 0.53
SIK3-211ENST00000485363 LIFRP42702 1097 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 GNAQP50148 359 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 CHMP4BP1P59074 171 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 LAMC2Q13753 1193 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 RNF20Q5VTR2 975 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 FCHSD1Q86WN1 690 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 DHX37Q8IY37 1157 aaKnown RBP18.37■□□□□ 0.53
SIK3-211ENST00000485363 HERVK_113Q902F9 699 aa18.37■□□□□ 0.53
SIK3-211ENST00000485363 CDX2Q99626 313 aaPredicted RBP18.37■□□□□ 0.53
SIK3-211ENST00000485363 SEC63Q9UGP8 760 aaKnown RBP18.37■□□□□ 0.53
SIK3-211ENST00000485363 RGS20O76081 388 aa18.36■□□□□ 0.53
SIK3-211ENST00000485363 DNAJB2P25686 324 aa18.36■□□□□ 0.53
SIK3-211ENST00000485363 CCND2P30279 289 aa18.36■□□□□ 0.53
SIK3-211ENST00000485363 DGKDQ16760 1214 aa18.36■□□□□ 0.53
SIK3-211ENST00000485363 NOD1Q9Y239 953 aa18.36■□□□□ 0.53
SIK3-211ENST00000485363 IL31RAQ8NI17 732 aa18.35■□□□□ 0.53
SIK3-211ENST00000485363 PPTC7Q8NI37 304 aa18.35■□□□□ 0.53
SIK3-211ENST00000485363 PPP1R13LQ8WUF5 828 aa18.35■□□□□ 0.53
SIK3-211ENST00000485363 SCLYQ96I15 445 aa18.35■□□□□ 0.53
SIK3-211ENST00000485363 SLC12A7Q9Y666 1083 aa18.35■□□□□ 0.53
SIK3-211ENST00000485363 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 CDC45O75419 566 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 PFKMP08237 780 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 TGFB3P10600 412 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 COL9A3Q14050 684 aaPredicted RBP18.34■□□□□ 0.53
SIK3-211ENST00000485363 OTOP2Q7RTS6 562 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 SESTD1Q86VW0 696 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 SRBD1Q8N5C6 995 aaKnown RBP18.34■□□□□ 0.53
SIK3-211ENST00000485363 RETREG2Q8NC44 543 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 KAT2BQ92831 832 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 CUL5Q93034 780 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 TIFAQ96CG3 184 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 KATNAL1Q9BW62 490 aa18.34■□□□□ 0.53
SIK3-211ENST00000485363 FRMPD4Q14CM0 1322 aa18.33■□□□□ 0.53
SIK3-211ENST00000485363 GRXCR1A8MXD5 290 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 PLEKHA8P1O95397 391 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 RXRAP19793 462 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 RFC2P35250 354 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 BFSP2Q13515 415 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 PTGISQ16647 500 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 CELF3Q5SZQ8 465 aaKnown RBP18.33■□□□□ 0.52
SIK3-211ENST00000485363 MYSM1Q5VVJ2 828 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 SMARCC2Q8TAQ2 1214 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 PBX4Q9BYU1 374 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 CXXC1Q9P0U4 656 aaPredicted RBP18.33■□□□□ 0.52
SIK3-211ENST00000485363 CDH23Q9H251 3354 aa18.33■□□□□ 0.52
SIK3-211ENST00000485363 SCN5AQ14524 2016 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 STAM2O75886 525 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 GGPS1O95749 300 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 F2P00734 622 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 GNPTABQ3T906 1256 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 SYNE3Q6ZMZ3 975 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 SGMS1Q86VZ5 419 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 C7orf31Q8N865 590 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 MYLIPQ8WY64 445 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 ZFP91Q96JP5 570 aaPredicted RBP18.32■□□□□ 0.52
SIK3-211ENST00000485363 SPATA33Q96N06 139 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 NEK1Q96PY6 1258 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 TANC1Q9C0D5 1861 aa18.32■□□□□ 0.52
SIK3-211ENST00000485363 TRIP12Q14669 1992 aaPredicted RBP18.31■□□□□ 0.52
SIK3-211ENST00000485363 PIK3CDO00329 1044 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 SORBS3O60504 671 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 PPFIA4O75335 1185 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 IQCF3P0C7M6 154 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
SIK3-211ENST00000485363 PBX2P40425 430 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 PSEN2P49810 448 aa18.31■□□□□ 0.52
SIK3-211ENST00000485363 SP2Q02086 613 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms