RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 A6NJR5 290 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 PIK3CDO00329 1044 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 KIAA0355O15063 1070 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 RPS6KB1P23443 525 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 NAPAP54920 295 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 CHMP4BP1P59074 171 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 NEDD9Q14511 834 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 LY6KQ17RY6 165 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 NLRX1Q86UT6 975 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 CMTR1Q8N1G2 835 aaKnown RBP10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 BADQ92934 168 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 CDHR1Q96JP9 859 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 KATNAL1Q9BW62 490 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 COL20A1Q9P218 1284 aa10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
RPRD1B-205ENST00000484683 SMCHD1A6NHR9 2005 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 NOP56O00567 594 aaKnown RBP10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 CPLX1O14810 134 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 OPLAHO14841 1288 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 CTAGE5O15320 804 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 TIMP1P01033 207 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 FOSP01100 380 aaPredicted RBP10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 CDK7P50613 346 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 PURAQ00577 322 aaKnown RBP10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 FPGSQ05932 587 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 FAAP100Q0VG06 881 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 PPIGQ13427 754 aaKnown RBP eCLIP10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 MCTP2Q6DN12 878 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 PPP1R18Q6NYC8 613 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 CCDC62Q6P9F0 684 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 USP17L6PQ6QN14 398 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 RUFY3Q7L099 469 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 TRIM22Q8IYM9 498 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 FBXL16Q8N461 479 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 GIMAP8Q8ND71 665 aaPredicted RBP10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 SPATA33Q96N06 139 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 USP26Q9BXU7 913 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 MTIF3Q9H2K0 278 aaKnown RBP10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 PRO3102Q9H379 93 aa10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 DDX41Q9UJV9 622 aaKnown RBP10.65□□□□□ -0.7
RPRD1B-205ENST00000484683 hCG_1642624A0A1W2PR95 340 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 TRIM43BA6NCK2 446 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 FIBPO43427 364 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 PPFIA4O75335 1185 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 FXR1P51114 621 aaKnown RBP eCLIP10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 ADCY7P51828 1080 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 APOBRQ0VD83 1088 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 SLC35G1Q2M3R5 365 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 LRIT3Q3SXY7 679 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 PCNX4Q63HM2 1172 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 NFRKBQ6P4R8 1299 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 SH3RF1Q7Z6J0 888 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 FAM126BQ8IXS8 530 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 RPUSD2Q8IZ73 545 aaKnown RBP10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 CCDC155Q8N6L0 562 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 C7orf31Q8N865 590 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 RETREG2Q8NC44 543 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 PPTC7Q8NI37 304 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 AFG1LQ8WV93 481 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 COPS5Q92905 334 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 TRIM43Q96BQ3 446 aaPredicted RBP10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 TM6SF1Q9BZW5 370 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 HIPK3Q9H422 1215 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
RPRD1B-205ENST00000484683 SMCO2A6NFE2 343 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 MAFGO15525 162 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 ARIH2O95376 493 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 GGPS1O95749 300 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 MMP3P08254 477 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 CPA1P15085 419 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 GNA11P29992 359 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 ZNF76P36508 570 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 ANAPC15P60006 121 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 PSMC6P62333 389 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 ANKRD1Q15327 319 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 NBPF20Q3BBV1 942 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 CELF3Q5SZQ8 465 aaKnown RBP10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 TMEM63BQ5T3F8 832 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 MFSD5Q6N075 450 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 SLC43A3Q8NBI5 491 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 CCDC148Q8NFR7 591 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 GPKOWQ92917 476 aaPredicted RBP eCLIP10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 ALDH8A1Q9H2A2 487 aaPredicted RBP10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 C6orf50Q9HD87 102 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 PDRG1Q9NUG6 133 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 BARHL2Q9NY43 387 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 RTEL1Q9NZ71 1219 aa10.63□□□□□ -0.71
RPRD1B-205ENST00000484683 MEIS2O14770 477 aa10.62□□□□□ -0.71
RPRD1B-205ENST00000484683 CDKL5O76039 1030 aa10.62□□□□□ -0.71
RPRD1B-205ENST00000484683 SLC34A2O95436 690 aa10.62□□□□□ -0.71
RPRD1B-205ENST00000484683 SCG2P13521 617 aa10.62□□□□□ -0.71
RPRD1B-205ENST00000484683 ADD1P35611 737 aaKnown RBP10.62□□□□□ -0.71
RPRD1B-205ENST00000484683 ARHGAP1Q07960 439 aa10.62□□□□□ -0.71
RPRD1B-205ENST00000484683 AP3B2Q13367 1082 aa10.62□□□□□ -0.71
RPRD1B-205ENST00000484683 BFSP2Q13515 415 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms