RNA–Protein interactions for RNA: ENST00000481710.5

SMIM11A-205, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-205ENST00000481710 PCDHA8Q9Y5H6 950 aa20.18■□□□□ 0.82
SMIM11A-205ENST00000481710 MYADML2A6NDP7 307 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 SPDYE3A6NKU9 549 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 EIF3JO75822 258 aaKnown RBP20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 RGS20O76081 388 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 MYCNP04198 464 aaPredicted RBP20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 CAPN2P17655 700 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 MRPS9P82933 396 aaKnown RBP20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 LRRC41Q15345 812 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 IQSEC1Q6DN90 963 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 SEPT14Q6ZU15 432 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 PAWRQ96IZ0 340 aaKnown RBP20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 WDR11Q9BZH6 1224 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 GLT8D2Q9H1C3 349 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 UPF3AQ9H1J1 476 aaKnown RBP20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 C6orf50Q9HD87 102 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 SH3GLB2Q9NR46 395 aa20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 SH2B1Q9NRF2 756 aaPredicted RBP20.17■□□□□ 0.82
SMIM11A-205ENST00000481710 DUSP28Q4G0W2 176 aa20.16■□□□□ 0.82
SMIM11A-205ENST00000481710 JAKMIP3Q5VZ66 844 aa20.16■□□□□ 0.82
SMIM11A-205ENST00000481710 TLK2Q86UE8 772 aa20.16■□□□□ 0.82
SMIM11A-205ENST00000481710 TEX2Q8IWB9 1127 aa20.16■□□□□ 0.82
SMIM11A-205ENST00000481710 RASGRP4Q8TDF6 673 aa20.16■□□□□ 0.82
SMIM11A-205ENST00000481710 SCFD2Q8WU76 684 aa20.16■□□□□ 0.82
SMIM11A-205ENST00000481710 ANO3Q9BYT9 981 aa20.16■□□□□ 0.82
SMIM11A-205ENST00000481710 GJB4Q9NTQ9 266 aa20.16■□□□□ 0.82
SMIM11A-205ENST00000481710 DNM1LO00429 736 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 CTAGE5O15320 804 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 GJA9P57773 515 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 NLRP5P59047 1200 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 AP3B2Q13367 1082 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 NPY5RQ15761 445 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 PCNX4Q63HM2 1172 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 REXO1Q8N1G1 1221 aaKnown RBP20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 ARRDC4Q8NCT1 418 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 COPS5Q92905 334 aa20.15■□□□□ 0.82
SMIM11A-205ENST00000481710 C6orf222P0C671 652 aaPredicted RBP20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 TXNP10599 105 aaKnown RBP20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 COL6A1P12109 1028 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 GNA11P29992 359 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 TTLL4Q14679 1199 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 CCDC62Q6P9F0 684 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 IL27Q8NEV9 243 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 ALG1Q9BT22 464 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 EHMT1Q9H9B1 1298 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 RTEL1Q9NZ71 1219 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 KCNJ14Q9UNX9 436 aa20.14■□□□□ 0.81
SMIM11A-205ENST00000481710 KBTBD13C9JR72 458 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 FOSP01100 380 aaPredicted RBP20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 BEX3Q00994 111 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 LY6KQ17RY6 165 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 NECAB2Q7Z6G3 386 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 RNF180Q86T96 592 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 KLHDC9Q8NEP7 349 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 TMX3Q96JJ7 454 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 INPP4AQ96PE3 977 aaPredicted RBP20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 PHF20Q9BVI0 1012 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 C11orf49Q9H6J7 331 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 PCDHA4Q9UN74 947 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 MRVI1Q9Y6F6 885 aa20.13■□□□□ 0.81
SMIM11A-205ENST00000481710 DYNC1LI2O43237 492 aaPredicted RBP20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 STAM2O75886 525 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 CST5P28325 142 aaPredicted RBP20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 SREBF1P36956 1147 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 FOSBP53539 338 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 SEMA3FQ13275 785 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 CCSAPQ6IQ19 270 aaPredicted RBP20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 XRRA1Q6P2D8 792 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 DAGLBQ8NCG7 672 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 OR6J1Q8NGC5 347 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 BICD2Q8TD16 824 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 WASF1Q92558 559 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 LLPHQ9BRT6 129 aaKnown RBP20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 DDX41Q9UJV9 622 aaKnown RBP20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 Q9Y3F1 56 aa20.12■□□□□ 0.81
SMIM11A-205ENST00000481710 NKRFO15226 690 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMIM11A-205ENST00000481710 MCM2P49736 904 aa20.11■□□□□ 0.81
SMIM11A-205ENST00000481710 NKX3-2P78367 333 aa20.11■□□□□ 0.81
SMIM11A-205ENST00000481710 BLIDQ8IZY5 108 aa20.11■□□□□ 0.81
SMIM11A-205ENST00000481710 FAM177A1Q8N128 213 aaPredicted RBP20.11■□□□□ 0.81
SMIM11A-205ENST00000481710 AP5M1Q9H0R1 490 aa20.11■□□□□ 0.81
SMIM11A-205ENST00000481710 SPC25Q9HBM1 224 aa20.11■□□□□ 0.81
SMIM11A-205ENST00000481710 PHF24Q9UPV7 400 aa20.11■□□□□ 0.81
SMIM11A-205ENST00000481710 M0R2N6 131 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 ITGB5P18084 799 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 ARHGAP4P98171 946 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 SP2Q02086 613 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 MLLT1Q03111 559 aaPredicted RBP20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 ARHGAP1Q07960 439 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 KCNA10Q16322 511 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 FSCN1Q16658 493 aaKnown RBP20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 GNPTABQ3T906 1256 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 CRYGNQ8WXF5 182 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 FERMT2Q96AC1 680 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 UBIAD1Q9Y5Z9 338 aa20.1■□□□□ 0.81
SMIM11A-205ENST00000481710 SCN10AQ9Y5Y9 1956 aa20.09■□□□□ 0.81
SMIM11A-205ENST00000481710 SORBS3O60504 671 aa20.09■□□□□ 0.81
SMIM11A-205ENST00000481710 GH1P01241 217 aa20.09■□□□□ 0.81
SMIM11A-205ENST00000481710 XBP1P17861 261 aa20.09■□□□□ 0.81
SMIM11A-205ENST00000481710 UBA1P22314 1058 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms