RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 FAM237AA0A1B0GTK4 181 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
USP39-215ENST00000481409 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 CCND2P30279 289 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 ZNF76P36508 570 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP39-215ENST00000481409 IRF5Q13568 498 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 PGM5Q15124 567 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 Q3C1V9 767 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 NOM1Q5C9Z4 860 aaKnown RBP11.51□□□□□ -0.57
USP39-215ENST00000481409 CYP4F22Q6NT55 531 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 C17orf99Q6UX52 265 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
USP39-215ENST00000481409 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
USP39-215ENST00000481409 NLRX1Q86UT6 975 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 ANKRD13CQ8N6S4 541 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 MRPS27Q92552 414 aaKnown RBP11.51□□□□□ -0.57
USP39-215ENST00000481409 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 CCDC34Q96HJ3 373 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 MTMR9Q96QG7 549 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 MMP19Q99542 508 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 PDCD2LQ9BRP1 358 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 FTOQ9C0B1 505 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP39-215ENST00000481409 GDPD2Q9HCC8 539 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 FAM13BQ9NYF5 915 aa11.51□□□□□ -0.57
USP39-215ENST00000481409 FBXO2Q9UK22 296 aaPredicted RBP11.51□□□□□ -0.57
USP39-215ENST00000481409 DDX49Q9Y6V7 483 aaKnown RBP11.51□□□□□ -0.57
USP39-215ENST00000481409 SLC15A5A6NIM6 579 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 ASB14A6NK59 587 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 MEIS1O00470 390 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 TXLNAP40222 546 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 STXBP2Q15833 593 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 GNPTABQ3T906 1256 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 AXDND1Q5T1B0 1012 aaPredicted RBP11.5□□□□□ -0.57
USP39-215ENST00000481409 KCNV1Q6PIU1 500 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 SLC30A10Q6XR72 485 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 CCDC73Q6ZRK6 1079 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 VSIG10LQ86VR7 867 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 MSL3Q8N5Y2 521 aaKnown RBP11.5□□□□□ -0.57
USP39-215ENST00000481409 FAM133AQ8N9E0 248 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 GPRASP2Q96D09 838 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 PGBD1Q96JS3 809 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 TAAR1Q96RJ0 339 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 MXRA8Q9BRK3 442 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 KCNMB3Q9NPA1 279 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 JADE2Q9NQC1 790 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 COL20A1Q9P218 1284 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 USP25Q9UHP3 1055 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 UBIAD1Q9Y5Z9 338 aa11.5□□□□□ -0.57
USP39-215ENST00000481409 THSD7BQ9C0I4 1608 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 EDIL3O43854 480 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 TRAK2O60296 914 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 MARCH6O60337 910 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 EIF3JO75822 258 aaKnown RBP11.49□□□□□ -0.57
USP39-215ENST00000481409 TDP2O95551 362 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 NR3C2P08235 984 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 EDNRBP24530 442 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 MARCKSP29966 332 aaPredicted RBP11.49□□□□□ -0.57
USP39-215ENST00000481409 ALDH5A1P51649 535 aaPredicted RBP11.49□□□□□ -0.57
USP39-215ENST00000481409 NBR1Q14596 966 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 RESP18Q5W5W9 173 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 PLEKHH3Q7Z736 793 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 ELOA2Q8IYF1 753 aaPredicted RBP11.49□□□□□ -0.57
USP39-215ENST00000481409 MORC4Q8TE76 937 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 TIGD1Q96MW7 591 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 RIT2Q99578 217 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 WDR11Q9BZH6 1224 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 DDX19AQ9NUU7 478 aaKnown RBP11.49□□□□□ -0.57
USP39-215ENST00000481409 PCDHA12Q9UN75 941 aa11.49□□□□□ -0.57
USP39-215ENST00000481409 IGLV3-22A0A075B6J6 115 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 FAM86B1E9PN63 330 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 WNT7AO00755 349 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 CTAGE5O15320 804 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 SLC37A4O43826 429 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 LETM1O95202 739 aaPredicted RBP11.48□□□□□ -0.57
USP39-215ENST00000481409 FAM86B2P0C5J1 330 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 TGFB3P10600 412 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 TAL1P17542 331 aaPredicted RBP11.48□□□□□ -0.57
USP39-215ENST00000481409 MUTP22033 750 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 FAM160A1Q05DH4 1040 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 GRB14Q14449 540 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 PRR16Q569H4 304 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 KANK3Q6NY19 840 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 GPR142Q7Z601 462 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 PLA2G4DQ86XP0 818 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 GIMAP8Q8ND71 665 aaPredicted RBP11.48□□□□□ -0.57
USP39-215ENST00000481409 ETNPPLQ8TBG4 499 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 LENG9Q96B70 501 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 INPP4AQ96PE3 977 aaPredicted RBP11.48□□□□□ -0.57
USP39-215ENST00000481409 CCSER1Q9C0I3 900 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 TMEM60Q9H2L4 133 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 TBC1D22BQ9NU19 505 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 SAGE1Q9NXZ1 904 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 HPSEQ9Y251 543 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 PLXNB2O15031 1838 aa11.48□□□□□ -0.57
USP39-215ENST00000481409 ZNFX1Q9P2E3 1918 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms