RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 EIF2AK2P19525 551 aaKnown RBP9.41□□□□□ -0.9
USP54-212ENST00000480210 ICAM3P32942 547 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 CIITAP33076 1130 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 CACNB2Q08289 660 aaPredicted RBP9.41□□□□□ -0.9
USP54-212ENST00000480210 ORC2Q13416 577 aaPredicted RBP9.41□□□□□ -0.9
USP54-212ENST00000480210 GNL2Q13823 731 aaKnown RBP9.41□□□□□ -0.9
USP54-212ENST00000480210 TTLL4Q14679 1199 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 CCL14Q16627 93 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 UBE2SQ16763 222 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 JAKMIP3Q5VZ66 844 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 SCFD2Q8WU76 684 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 GPRASP2Q96D09 838 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 ZNF333Q96JL9 665 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 AIFM3Q96NN9 605 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 FLRT1Q9NZU1 646 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 COL20A1Q9P218 1284 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 KCNJ14Q9UNX9 436 aa9.41□□□□□ -0.9
USP54-212ENST00000480210 MYH9P35579 1960 aaKnown RBP9.41□□□□□ -0.9
USP54-212ENST00000480210 KIAA0100Q14667 2235 aaKnown RBP9.4□□□□□ -0.9
USP54-212ENST00000480210 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 DUSP11O75319 330 aaKnown RBP9.4□□□□□ -0.9
USP54-212ENST00000480210 ZNF865P0CJ78 1059 aaPredicted RBP9.4□□□□□ -0.9
USP54-212ENST00000480210 MYCLP12524 364 aaPredicted RBP9.4□□□□□ -0.9
USP54-212ENST00000480210 ELNP15502 786 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 GCFC2P16383 781 aaKnown RBP9.4□□□□□ -0.9
USP54-212ENST00000480210 U2AF2P26368 475 aaKnown RBP eCLIP9.4□□□□□ -0.9
USP54-212ENST00000480210 CYP2C19P33261 490 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 ZNF76P36508 570 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 TRAPPC10P48553 1259 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 ARHGAP4P98171 946 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
USP54-212ENST00000480210 NEDD9Q14511 834 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 NPY5RQ15761 445 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 DIS3L2Q8IYB7 885 aaKnown RBP9.4□□□□□ -0.9
USP54-212ENST00000480210 SENP7Q9BQF6 1050 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 MXRA8Q9BRK3 442 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 KATNBL1Q9H079 304 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 SPC25Q9HBM1 224 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 JADE2Q9NQC1 790 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 NOL7Q9UMY1 257 aaKnown RBP9.4□□□□□ -0.9
USP54-212ENST00000480210 UBIAD1Q9Y5Z9 338 aa9.4□□□□□ -0.9
USP54-212ENST00000480210 LRRC37A2A6NM11 1700 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 ASTN1O14525 1302 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 CYP3A7-CYP3A51PA0A087WV96 503 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 FIBPO43427 364 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 ZEB2O60315 1214 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 GJB1P08034 283 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 RARBP10826 455 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 CYP3A7P24462 503 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 CNGA1P29973 690 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 NKX3-2P78367 333 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 TNFAIP2Q03169 654 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 DUSP28Q4G0W2 176 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 CEP55Q53EZ4 464 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 BRDTQ58F21 947 aaPredicted RBP9.39□□□□□ -0.91
USP54-212ENST00000480210 PPP4R3AQ6IN85 833 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 TAPT1Q6NXT6 567 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 BRAPQ7Z569 592 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 NEK8Q86SG6 692 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 ARRDC4Q8NCT1 418 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 TBCKQ8TEA7 893 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 SH3TC2Q8TF17 1288 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 CRYGNQ8WXF5 182 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 SHISA4Q96DD7 197 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 INPP4AQ96PE3 977 aaPredicted RBP9.39□□□□□ -0.91
USP54-212ENST00000480210 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP54-212ENST00000480210 RNF208Q9H0X6 261 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 ZSCAN16Q9H4T2 348 aaPredicted RBP9.39□□□□□ -0.91
USP54-212ENST00000480210 PAK6Q9NQU5 681 aaPredicted RBP9.39□□□□□ -0.91
USP54-212ENST00000480210 DDX20Q9UHI6 824 aaKnown RBP9.39□□□□□ -0.91
USP54-212ENST00000480210 ZHX1Q9UKY1 873 aaPredicted RBP9.39□□□□□ -0.91
USP54-212ENST00000480210 FRMPD3Q5JV73 1810 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 WDR81Q562E7 1941 aa9.39□□□□□ -0.91
USP54-212ENST00000480210 SPATA31C2B4DYI2 1134 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 MEIS1O00470 390 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 TBX3O15119 743 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 STX6O43752 255 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 KPNA6O60684 536 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 SGPL1O95470 568 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 TXNP10599 105 aaKnown RBP9.38□□□□□ -0.91
USP54-212ENST00000480210 CCL5P13501 91 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 SYT1P21579 422 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 MRPS9P82933 396 aaKnown RBP9.38□□□□□ -0.91
USP54-212ENST00000480210 LAMC2Q13753 1193 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 CCDC144BQ3MJ40 725 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 Q4G0T1 1027 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 COL13A1Q5TAT6 717 aaPredicted RBP9.38□□□□□ -0.91
USP54-212ENST00000480210 PIK3AP1Q6ZUJ8 805 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 NOSTRINQ8IVI9 506 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 ANKLE1Q8NAG6 615 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 TNFRSF25Q93038 417 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
USP54-212ENST00000480210 SEZ6LQ9BYH1 1024 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 WDR11Q9BZH6 1224 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 AP5M1Q9H0R1 490 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 TMEM260Q9NX78 707 aa9.38□□□□□ -0.91
USP54-212ENST00000480210 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
USP54-212ENST00000480210 MRVI1Q9Y6F6 885 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms