RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 DDX49Q9Y6V7 483 aaKnown RBP12.75□□□□□ -0.37
CLDN11-205ENST00000480067 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 STAM2O75886 525 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 SNAI1O95863 264 aaPredicted RBP12.74□□□□□ -0.37
CLDN11-205ENST00000480067 CYP3A4P08684 503 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 ATP2B1P20020 1258 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 GRK4P32298 578 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 NUCB2P80303 420 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 MRPS9P82933 396 aaKnown RBP12.74□□□□□ -0.37
CLDN11-205ENST00000480067 PKP1Q13835 747 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 LETM2Q2VYF4 491 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 EEPD1Q7L9B9 569 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 BRAPQ7Z569 592 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 MORC4Q8TE76 937 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 ABHD16BQ9H3Z7 469 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
CLDN11-205ENST00000480067 DOCK3Q8IZD9 2030 aa12.74□□□□□ -0.37
CLDN11-205ENST00000480067 FAM205CA6NFA0 338 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 HMGCRP04035 888 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 ACVR2BQ13705 512 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 GNPTABQ3T906 1256 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 ZFP91Q96JP5 570 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-205ENST00000480067 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
CLDN11-205ENST00000480067 CASP8AP2Q9UKL3 1982 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 MGAMO43451 1857 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 CCNT1O60563 726 aaKnown RBP12.73□□□□□ -0.37
CLDN11-205ENST00000480067 BRD1O95696 1058 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 IGHA2P01877 340 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 DDIT3P35638 169 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 TRAPPC10P48553 1259 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 SLC9C1Q4G0N8 1177 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 FBXO46Q6PJ61 603 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-205ENST00000480067 SEPT14Q6ZU15 432 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 NLRX1Q86UT6 975 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 MXRA8Q9BRK3 442 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 VTA1Q9NP79 307 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 ZHX1Q9UKY1 873 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-205ENST00000480067 ZSWIM8A7E2V4 1837 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 ZNF236Q9UL36 1845 aa12.73□□□□□ -0.37
CLDN11-205ENST00000480067 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
CLDN11-205ENST00000480067 FAM86B1E9PN63 330 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 MEIS1O00470 390 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 F13A1P00488 732 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 FAM86B2P0C5J1 330 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 GCFC2P16383 781 aaKnown RBP12.72□□□□□ -0.37
CLDN11-205ENST00000480067 ITGB5P18084 799 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 CIITAP33076 1130 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 RESTQ13127 1097 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 MTMR1Q13613 665 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 PRR16Q569H4 304 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 PPP4R3AQ6IN85 833 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 FBXO16Q8IX29 292 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-205ENST00000480067 CYP2W1Q8TAV3 490 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 SH3TC2Q8TF17 1288 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 CDHR1Q96JP9 859 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 INPP4AQ96PE3 977 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-205ENST00000480067 JADE2Q9NQC1 790 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-205ENST00000480067 UBIAD1Q9Y5Z9 338 aa12.72□□□□□ -0.37
CLDN11-205ENST00000480067 CYP3A7-CYP3A51PA0A087WV96 503 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 MAFGO15525 162 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 TDP2O95551 362 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 INHAP05111 366 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
CLDN11-205ENST00000480067 CYP3A7P24462 503 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 CNGA1P29973 690 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 CACNB2Q08289 660 aaPredicted RBP12.71□□□□□ -0.37
CLDN11-205ENST00000480067 TRIM32Q13049 653 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 KCNV1Q6PIU1 500 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 MOXD1Q6UVY6 613 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 NIPA1Q7RTP0 329 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 SCFD2Q8WU76 684 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 DDX25Q9UHL0 483 aaKnown RBP12.71□□□□□ -0.37
CLDN11-205ENST00000480067 ATP6V1DQ9Y5K8 247 aa12.71□□□□□ -0.37
CLDN11-205ENST00000480067 RBBP6Q7Z6E9 1792 aaKnown RBP12.71□□□□□ -0.38
CLDN11-205ENST00000480067 BRCA2P51587 3418 aa12.71□□□□□ -0.38
CLDN11-205ENST00000480067 FIBPO43427 364 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 EDIL3O43854 480 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 MARCH6O60337 910 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 RGS20O76081 388 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 ZNF865P0CJ78 1059 aaPredicted RBP12.7□□□□□ -0.38
CLDN11-205ENST00000480067 TGFB3P10600 412 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 MCM7P33993 719 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 TOB1P50616 345 aaPredicted RBP12.7□□□□□ -0.38
CLDN11-205ENST00000480067 SETQ01105 290 aaPredicted RBP12.7□□□□□ -0.38
CLDN11-205ENST00000480067 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 ZNF174Q15697 407 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
CLDN11-205ENST00000480067 Q4G0T1 1027 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 TTC38Q5R3I4 469 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 IQSEC1Q6DN90 963 aa12.7□□□□□ -0.38
CLDN11-205ENST00000480067 TAPT1Q6NXT6 567 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms