RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 HMGB1P09429 215 aaKnown RBP17.4■□□□□ 0.38
PRKN-207ENST00000479615 CSF2RAP15509 400 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 PTGS1P23219 599 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 CCND2P30279 289 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 LY6KQ17RY6 165 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 XRRA1Q6P2D8 792 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 SGMS1Q86VZ5 419 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 CUL5Q93034 780 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 NOC4LQ9BVI4 516 aaKnown RBP17.4■□□□□ 0.38
PRKN-207ENST00000479615 KATNAL1Q9BW62 490 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 PPP1R12CQ9BZL4 782 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 TRPV6Q9H1D0 765 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 MMP3P08254 477 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 CYP2C18P33260 490 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 ARHGAP1Q07960 439 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 PGM5Q15124 567 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 SLC35G1Q2M3R5 365 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 NBPF20Q3BBV1 942 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 TMEM240Q5SV17 173 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 Q7L0L9 218 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 SESTD1Q86VW0 696 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 DHX37Q8IY37 1157 aaKnown RBP17.39■□□□□ 0.37
PRKN-207ENST00000479615 PPTC7Q8NI37 304 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 AFG1LQ8WV93 481 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 COPS5Q92905 334 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
PRKN-207ENST00000479615 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.39■□□□□ 0.37
PRKN-207ENST00000479615 PIK3CDO00329 1044 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 PITPNM1O00562 1244 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 PPFIA4O75335 1185 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 FGBP02675 491 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 MYCLP12524 364 aaPredicted RBP17.38■□□□□ 0.37
PRKN-207ENST00000479615 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
PRKN-207ENST00000479615 RFC2P35250 354 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 FAM47CQ5HY64 1035 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 RASIP1Q5U651 963 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 CCDC155Q8N6L0 562 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 HERVK_113Q902F9 699 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 RBM28Q9NW13 759 aaKnown RBP17.38■□□□□ 0.37
PRKN-207ENST00000479615 NOD1Q9Y239 953 aa17.38■□□□□ 0.37
PRKN-207ENST00000479615 BFSP2Q13515 415 aa17.37■□□□□ 0.37
PRKN-207ENST00000479615 ZNF365Q70YC5 407 aa17.37■□□□□ 0.37
PRKN-207ENST00000479615 C16orf59Q7L2K0 433 aa17.37■□□□□ 0.37
PRKN-207ENST00000479615 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
PRKN-207ENST00000479615 FCHSD1Q86WN1 690 aa17.37■□□□□ 0.37
PRKN-207ENST00000479615 RETREG2Q8NC44 543 aa17.37■□□□□ 0.37
PRKN-207ENST00000479615 SEMA6BQ9H3T3 888 aa17.37■□□□□ 0.37
PRKN-207ENST00000479615 TRMT13Q9NUP7 481 aaKnown RBP17.37■□□□□ 0.37
PRKN-207ENST00000479615 PARNO95453 639 aaKnown RBP17.36■□□□□ 0.37
PRKN-207ENST00000479615 RCAN1P53805 252 aa17.36■□□□□ 0.37
PRKN-207ENST00000479615 CELF3Q5SZQ8 465 aaKnown RBP17.36■□□□□ 0.37
PRKN-207ENST00000479615 MYSM1Q5VVJ2 828 aa17.36■□□□□ 0.37
PRKN-207ENST00000479615 SRBD1Q8N5C6 995 aaKnown RBP17.36■□□□□ 0.37
PRKN-207ENST00000479615 SMARCC2Q8TAQ2 1214 aa17.36■□□□□ 0.37
PRKN-207ENST00000479615 MYL10Q9BUA6 226 aa17.36■□□□□ 0.37
PRKN-207ENST00000479615 FRMPD4Q14CM0 1322 aa17.36■□□□□ 0.37
PRKN-207ENST00000479615 RGS20O76081 388 aa17.35■□□□□ 0.37
PRKN-207ENST00000479615 HOXD8P13378 290 aaPredicted RBP17.35■□□□□ 0.37
PRKN-207ENST00000479615 ICAM3P32942 547 aa17.35■□□□□ 0.37
PRKN-207ENST00000479615 CCL23P55773 120 aa17.35■□□□□ 0.37
PRKN-207ENST00000479615 NEDD9Q14511 834 aa17.35■□□□□ 0.37
PRKN-207ENST00000479615 CAGE1Q8TC20 777 aa17.35■□□□□ 0.37
PRKN-207ENST00000479615 PSTPIP2Q9H939 334 aa17.35■□□□□ 0.37
PRKN-207ENST00000479615 MLXIPQ9HAP2 919 aa17.35■□□□□ 0.37
PRKN-207ENST00000479615 MYH6P13533 1939 aa17.35■□□□□ 0.37
PRKN-207ENST00000479615 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
PRKN-207ENST00000479615 F2P00734 622 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 NEFLP07196 543 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 ACRP10323 421 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 ACTN1P12814 892 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 EXOSC10Q01780 885 aaKnown RBP17.34■□□□□ 0.37
PRKN-207ENST00000479615 RAB30Q15771 203 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 PTGISQ16647 500 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 PCNX4Q63HM2 1172 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 TMTC3Q6ZXV5 915 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 C7orf31Q8N865 590 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 GIMAP8Q8ND71 665 aaPredicted RBP17.34■□□□□ 0.37
PRKN-207ENST00000479615 SLC17A8Q8NDX2 589 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 PIBF1Q8WXW3 757 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 CDHR1Q96JP9 859 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 SPATA33Q96N06 139 aa17.34■□□□□ 0.37
PRKN-207ENST00000479615 INPP4AQ96PE3 977 aaPredicted RBP17.34■□□□□ 0.37
PRKN-207ENST00000479615 hCG_1984214I3L0E3 225 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 MEIS2O14770 477 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 FIBPO43427 364 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 REC8O95072 547 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 GGPS1O95749 300 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 CYP2C9P11712 490 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 DNAJB2P25686 324 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 APOA5Q6Q788 366 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 NLRX1Q86UT6 975 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 MICU3Q86XE3 530 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 ZNF713Q8N859 430 aaPredicted RBP17.33■□□□□ 0.36
PRKN-207ENST00000479615 AFAP1L1Q8TED9 768 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 KAT2BQ92831 832 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 GUCD1Q96NT3 240 aa17.33■□□□□ 0.36
PRKN-207ENST00000479615 SENP7Q9BQF6 1050 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms