RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 SLC30A10Q6XR72 485 aa18.34■□□□□ 0.53
GARNL3-215ENST00000478702 PPP1R13LQ8WUF5 828 aa18.34■□□□□ 0.53
GARNL3-215ENST00000478702 NECAB3Q96P71 396 aaPredicted RBP18.34■□□□□ 0.53
GARNL3-215ENST00000478702 JMJD4Q9H9V9 463 aa18.34■□□□□ 0.53
GARNL3-215ENST00000478702 POLR3EQ9NVU0 708 aa18.34■□□□□ 0.53
GARNL3-215ENST00000478702 ABCB11O95342 1321 aa18.33■□□□□ 0.53
GARNL3-215ENST00000478702 KLRF2D3W0D1 207 aa18.33■□□□□ 0.52
GARNL3-215ENST00000478702 RFXAPO00287 272 aa18.33■□□□□ 0.52
GARNL3-215ENST00000478702 SH2B2O14492 632 aaPredicted RBP18.33■□□□□ 0.52
GARNL3-215ENST00000478702 DHX16O60231 1041 aaKnown RBP18.33■□□□□ 0.52
GARNL3-215ENST00000478702 BMP1P13497 986 aa18.33■□□□□ 0.52
GARNL3-215ENST00000478702 USH1GQ495M9 461 aa18.33■□□□□ 0.52
GARNL3-215ENST00000478702 DEFB128Q7Z7B8 93 aa18.33■□□□□ 0.52
GARNL3-215ENST00000478702 MTMR8Q96EF0 704 aa18.33■□□□□ 0.52
GARNL3-215ENST00000478702 TMEM87BQ96K49 555 aa18.33■□□□□ 0.52
GARNL3-215ENST00000478702 ADD3Q9UEY8 706 aaKnown RBP18.33■□□□□ 0.52
GARNL3-215ENST00000478702 BRWD1Q9NSI6 2320 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 DDAH1O94760 285 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 PFKMP08237 780 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 MYL3P08590 195 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 SUPT20HL2P0C7V6 817 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 TFF2Q03403 129 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
GARNL3-215ENST00000478702 SLC35G1Q2M3R5 365 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 CATIPQ7Z7H3 387 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 ZNF654Q8IZM8 581 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 MICALL1Q8N3F8 863 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 OR6J1Q8NGC5 347 aa18.32■□□□□ 0.52
GARNL3-215ENST00000478702 GPHNQ9NQX3 736 aaPredicted RBP18.32■□□□□ 0.52
GARNL3-215ENST00000478702 PTPDC1A2A3K4 754 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 EPOPA6NHQ4 379 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 ARHGEF15O94989 841 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 CA3P07451 260 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 POU3F3P20264 500 aaPredicted RBP18.31■□□□□ 0.52
GARNL3-215ENST00000478702 CPT1AP50416 773 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 NBPF20Q3BBV1 942 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 TSGA10IPQ3SY00 556 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 FBXO11Q86XK2 927 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 COPS5Q92905 334 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 MAP3K14Q99558 947 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 MTG1Q9BT17 334 aaPredicted RBP18.31■□□□□ 0.52
GARNL3-215ENST00000478702 MAF1Q9H063 256 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 MTCH2Q9Y6C9 303 aa18.31■□□□□ 0.52
GARNL3-215ENST00000478702 SIP14410 1827 aa18.3■□□□□ 0.52
GARNL3-215ENST00000478702 EDNRBP24530 442 aa18.3■□□□□ 0.52
GARNL3-215ENST00000478702 CALML3P27482 149 aa18.3■□□□□ 0.52
GARNL3-215ENST00000478702 LIFRP42702 1097 aa18.3■□□□□ 0.52
GARNL3-215ENST00000478702 KCNQ1P51787 676 aa18.3■□□□□ 0.52
GARNL3-215ENST00000478702 RPS6P62753 249 aaKnown RBP18.3■□□□□ 0.52
GARNL3-215ENST00000478702 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
GARNL3-215ENST00000478702 RIOX1Q9H6W3 641 aa18.3■□□□□ 0.52
GARNL3-215ENST00000478702 CERS4Q9HA82 394 aa18.3■□□□□ 0.52
GARNL3-215ENST00000478702 A6NJR5 290 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 ZBTB5O15062 677 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 CYTH3O43739 400 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 PPP1R11O60927 126 aaPredicted RBP18.29■□□□□ 0.52
GARNL3-215ENST00000478702 IQCF3P0C7M6 154 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 KRT40Q6A162 431 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 RGS22Q8NE09 1264 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 KCNB2Q92953 911 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 MYL10Q9BUA6 226 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 AMNQ9BXJ7 453 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 TSPYL2Q9H2G4 693 aaPredicted RBP18.29■□□□□ 0.52
GARNL3-215ENST00000478702 VAT1LQ9HCJ6 419 aa18.29■□□□□ 0.52
GARNL3-215ENST00000478702 PITPNM1O00562 1244 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 REC8O95072 547 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 ARIH2O95376 493 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 KRT32Q14532 448 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 ADCK5Q3MIX3 580 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 NFRKBQ6P4R8 1299 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 SPRED2Q7Z698 418 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 SGMS1Q86VZ5 419 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 TMTC2Q8N394 836 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 DNERQ8NFT8 737 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 CTCFLQ8NI51 663 aaPredicted RBP18.28■□□□□ 0.52
GARNL3-215ENST00000478702 NEK1Q96PY6 1258 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 SLC9A7Q96T83 725 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 LRRC2Q9BYS8 371 aa18.28■□□□□ 0.52
GARNL3-215ENST00000478702 MRPL11Q9Y3B7 192 aaKnown RBP18.28■□□□□ 0.52
GARNL3-215ENST00000478702 CCDC69A6NI79 296 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 OPLAHO14841 1288 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 NKRFO15226 690 aaKnown RBP eCLIP18.27■□□□□ 0.52
GARNL3-215ENST00000478702 ACTN1P12814 892 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 KIF5BP33176 963 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 HSPA4P34932 840 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 RFC2P35250 354 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 GHRHRQ02643 423 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 TAP1Q03518 808 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 PPP2R5BQ15173 497 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 NFXL1Q6ZNB6 911 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 HOMER1Q86YM7 354 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 SCFD2Q8WU76 684 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 CTAGE1Q96RT6 745 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 PIGSQ96S52 555 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 SPZ1Q9BXG8 430 aa18.27■□□□□ 0.52
GARNL3-215ENST00000478702 MICAL3Q7RTP6 2002 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms